Sphingopyxis indica: KNJ79_06920
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Entry
KNJ79_06920 CDS
T09492
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sina
Sphingopyxis indica
Brite
KEGG Orthology (KO) [BR:
sina00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sina03032
]
KNJ79_06920 (gyrA)
03400 DNA repair and recombination proteins [BR:
sina03400
]
KNJ79_06920 (gyrA)
Enzymes [BR:
sina01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KNJ79_06920 (gyrA)
DNA replication proteins [BR:
sina03032
]
Prokaryotic type
DNA Topoisomerases
KNJ79_06920 (gyrA)
DNA repair and recombination proteins [BR:
sina03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KNJ79_06920 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
WOF45309
LinkDB
All DBs
Position
complement(1482452..1485178)
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AA seq
908 aa
AA seq
DB search
MPPSEDGVSPINIVDEMKTSYLDYAMSVIVARALPDVRDGLKPVHRRILYAAQEGGFVPG
RPYKKSAKIVGDVMGNYHPHGDSAIYDALARMTQDWSLRVPLIDGQGNFGSMDPDPPASM
RYTEARLAKTAMVLLNDLDKDTVDFQPNYDASREEPTVLPARFPNLLVNGAGGIAVGMAT
NIPPHNLGEVIDACLATIDRQLEGGAPLSTEELMQIIPGPDFPTGAMILGQGGIRNAYTT
GRGSIMMRATHEIEEGRGRGEGRRSIVLTSIPFQVGKSGLVEKIAEAARDKRIEGVADIR
DESNREGVRIVIDLKRDATADVVLNQLWRHTPAQSSFPANMLAIRGGRPEMLGLQDILTA
FIAFREEVITRRCKYELAKARDRAHILLGLVVAVSNLDEVVRIIRGAPNPAAAREALLAR
EWPIGEIAPYIRLVEAIEGEMEESAVYRLSEIQVKAILDLRLHRLTALGRDEIGDELKEL
AAVIEELLSILADRVKLYGVMREELVAVRDEFATPRKTLMAPAADGIDDEDLIEREEMVV
TVTMDGYIKRTPLDTFRAQRRGGKGRAGMATKDEDVVTELFVTSTHTPVLFFSTLGRVYR
MKVWRLPEGGPATRGRPMVNLLPLETGETISTVLPLPEDEEEWGKLHVMFATAKGSVRRN
SMDAFTNVPSNGKIAMKFEGEDADDRLIGVALLDESDDVLLATRQGKAIRFAGDDVREFQ
SRNSTGVRGMRLAAGDEVISLSILHRTGIADQEEREDYLRHAPWKGEDPDRTPRRMDDAR
YAELAAREQFILTVCANGYGKLSSAVEYRRTGRGGQGITNIDNIGRNGPVVASFPATQAH
QLMLVTDQAKLIRMGLDSLRVIGRGSAGVRLFDVAEGEHVVSAALIEESEEEAGEAVEPA
EAAKDGDA
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgtccgaggatggcgtgtcgccgatcaacatcgtcgatgaaatgaagacgtcc
tacctcgattacgcgatgagcgtgatcgttgcccgcgcgcttcccgacgtgcgcgacggc
ctgaagcccgtccaccggcgcattctctatgccgcgcaggaaggcggcttcgtccccggc
cggccgtacaagaaatcggcgaagatcgtcggcgacgtgatgggcaattatcacccgcat
ggcgacagcgccatctatgacgcgctcgcgcgcatgacgcaggactggtcgctgcgcgtg
cccttgatcgacggtcagggcaatttcggctcgatggaccccgatccgccggcgtcgatg
cgttacaccgaggcgcggcttgccaagaccgcgatggtgctgctgaacgatctcgacaag
gatacggtcgactttcagcccaactatgacgcgagccgcgaagagccgacggtcctcccg
gcgcgctttccgaacctgctcgtcaacggcgcgggcggcatcgcggtcggcatggcgacg
aacatcccgccgcacaatctgggcgaagtgatcgacgcctgcctcgcgacgatcgaccgc
cagctcgagggcggcgcgccgctgtcgaccgaagagctgatgcagatcatcccgggtccc
gatttcccgaccggcgcgatgatcctgggccagggcggcatccgcaacgcctataccacc
gggcgcggctcgatcatgatgcgcgcgacgcacgagatcgaggaaggccgcggcagggga
gaagggcgccggtcgatcgtcctgacctcgatcccctttcaggtcggcaagtcggggctc
gtcgaaaaaatcgccgaagcggcgcgcgacaagcgcatcgagggcgtcgccgacattcgc
gacgaatcgaaccgcgaaggggtgcgcatcgtcatcgacctgaagcgcgatgcgaccgcc
gacgtcgtgctcaaccagctgtggcggcacacgccggcgcagtcgagctttcccgcgaac
atgctcgcgatccgcggcggccgccccgagatgctggggctgcaggatattttgacggcc
ttcatcgcctttcgcgaagaggtgatcacccgccgctgcaaatatgagctcgcgaaggcg
cgcgaccgcgcgcacatcttgctggggctcgtcgtcgcggtgtcgaacctcgacgaggtg
gtgcggatcatccgcggcgcgccgaaccccgccgcggcgcgcgaggcgctgctcgcgcgc
gaatggccgatcggcgaaatcgcgccctatatccgcctcgtcgaagcgatcgagggcgaa
atggaagagagcgccgtctatcgcctctccgaaatacaggtgaaggcgatcctcgacctg
cgcctccaccgcctgaccgcgctcggccgcgacgagatcggcgacgaattgaaggagctg
gcggcggtcatcgaggagctgctgtcgatcctcgccgatcgcgtcaaactctatggcgtg
atgcgcgaggaactcgtcgcggtgcgcgacgaattcgcgacgccgcgcaagacgctgatg
gcgcccgccgccgacgggatcgacgacgaggatctgatcgaacgcgaggagatggtcgtc
acggtgacgatggacggctatatcaagcgcaccccgctcgacaccttccgcgcgcagcgc
cgcggcggcaaggggcgcgccggcatggcgacgaaggacgaggatgtcgtcaccgagctg
ttcgtcacctcgacgcacacgccggtgctcttcttctcgaccctcggccgcgtctatcgc
atgaaggtgtggcgcctgcccgaaggcggccccgcgacgcgcgggcggccgatggtcaac
ctgctcccgctcgaaaccggcgagacgatctcgaccgtgctgccgctgcccgaggatgaa
gaggagtggggcaagctgcacgtcatgttcgcgaccgcgaagggcagcgtgcgccgcaac
agcatggacgccttcaccaacgtgccgtcgaacggcaagatcgcgatgaagttcgagggc
gaggatgccgacgaccggctgatcggcgtcgcgctgctcgacgaaagcgacgatgtgctg
ctcgcgacgcggcagggcaaggcgatccgctttgccggcgacgatgtccgcgaattccag
agccgcaactcgaccggcgtgcgcgggatgcgcctcgcggcgggcgacgaggtgatctcg
ctgtcgatcctgcaccgcaccggcatcgccgatcaggaggagcgcgaggattatctgcgc
cacgcgccgtggaagggcgaagaccccgaccgcacgccgcgccgcatggacgacgcgcgc
tatgccgagctggcggcgcgcgagcagttcatcctgaccgtctgcgccaacggctatggc
aagctgtcgtcggcggtcgaatatcgccgcaccggccgcggcggccaggggatcaccaac
atcgacaatatcggccgcaacgggccggtggtcgcgagtttccccgcgacgcaggcgcat
cagctgatgctcgtcaccgaccaggcgaagctgatccgcatggggctcgacagcctgcgc
gtcatcggccgcggctcggcgggcgtgcggctgttcgacgtcgccgagggcgagcatgtc
gtgtcggcggcactgattgaggagagcgaggaagaggccggcgaagcggtcgagccggcg
gaagcggccaaggacggcgacgcatga
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