Sphingopyxis indica: KNJ79_07175
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Entry
KNJ79_07175 CDS
T09492
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
sina
Sphingopyxis indica
Pathway
sina00550
Peptidoglycan biosynthesis
sina01100
Metabolic pathways
sina01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sina00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KNJ79_07175 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KNJ79_07175 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sina01011
]
KNJ79_07175 (mrdA)
Enzymes [BR:
sina01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
KNJ79_07175 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
sina01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
KNJ79_07175 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WOF44682
LinkDB
All DBs
Position
complement(1540619..1542535)
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AA seq
638 aa
AA seq
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MPRQKRPPITEAWRGITFTRRALVVGGAQAAVGVALAARMAYISIIDNDRYVLESESNRV
NLTLVPPRRGWIVDRNGKAMANNRVSLRIDIIPDRLHDKDFVLGQLETLLNLDGDTMQRI
RRDLKSSSGFQPVAVKEDVSEAEYASVLVRLPDLPGIAPARGFARYYPTGAAVGHLIGYV
GAPNAEEYEEAKDPLYITPGFKIGKQALEKYFEPVLRGKPGARRVEVTARGKVVRELSTQ
PDVQGQTVQLTVDADLQEYAARRLGPESGSVVVIDCLTGDVLAMASMPSFDPNSFSSGIG
VAEYKWLSQNDHVPLRNKTLSGLYPAGSTVKPMVAMSFLEAGLPAEATTFCGGGLRVGNR
VFHCWNRRGHGQVNMAKGIYQSCDVYFYHFAQQMGMDVIAAMGKRLGLGQKFPLPVPSQS
YGTMPSPDWKMEKYGRPWTIADTVNATIGQGYVLVNPTQLAVMASRLATGNALMPHLTRD
ANRAPIQSLGFAPDHIGLVREAMNQVVNGAGTAGRARLPIEDVKMAGKTGTAQVVSLSKG
RGGMGVPWKYRDHGLFIAFAPFDAPRYAAAVVIEHGAGSSSAYPVARDVMTFLFDRDKAM
AALTEYEAGWGGTIEERMARNFAAWKAGAAQPDPEPGA
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgccccgacaaaagcgcccgccgatcaccgaagcctggagggggatcaccttcacgcgc
cgcgcgctcgtcgtcggcggcgcgcaagccgccgtgggcgtcgcgcttgccgcgcgcatg
gcctatatctcgattatcgacaatgatcgctacgtccttgaatccgaaagcaatcgcgtc
aatctgacgctcgtgccgccgcggcgcggctggatcgtcgaccggaacggcaaggcgatg
gcgaacaaccgcgtgtcgctgcgcatcgacatcatccccgaccgcctccacgacaaggac
ttcgtcctcggccagctcgagacgctgctgaacctcgatggcgatacgatgcagcggatc
cggcgcgacctgaaaagctcgtcggggtttcagccggttgcggtcaaggaggacgtcagc
gaagccgaatatgcctcggtcctcgtccgcctgcccgacctgcccggcatcgcgccggcg
cgcggctttgcgcgctattatccgacgggcgccgcggtcggccatctgatcggttatgtc
ggcgcccccaatgccgaggaatatgaagaggcgaaggacccgctttatatcacgccgggt
ttcaagatcggcaagcaagcgcttgagaaatattttgaacccgtgctgcgcggcaagccc
ggcgcgcgccgggtcgaggtgaccgcgcgcggcaaggtcgtgcgcgaactgtcgacgcag
cccgacgtgcagggccagacggtgcaactgacggtcgatgccgacctgcaggaatatgcg
gcgcggcggctcggtcccgaatcgggctcggtcgtcgtgatcgactgcctgaccggcgat
gtgctcgcgatggcgtcgatgccgagtttcgacccgaacagcttttcgagcggcataggc
gtcgccgaatataagtggctgagccagaacgaccatgtgccgctgcgcaacaagacgctg
agcggcctctatcccgccggctcgacggtgaaaccgatggtcgcgatgagctttctcgag
gcggggcttcccgccgaagccacgaccttttgcggcggcggcctgcgcgtcggcaaccgc
gtcttccactgctggaaccggcgcggccacggccaggtcaacatggcgaagggcatctat
cagagctgcgacgtctatttctatcacttcgcgcagcagatggggatggacgtcatcgcg
gcgatgggcaagcggctgggactggggcagaaatttcccctccccgtccccagccaaagc
tatggcaccatgcccagccccgactggaagatggaaaaatacggccgcccctggacgatc
gccgacacggtgaacgcgacgatcggtcaaggctatgtgctggtcaacccgacccagctc
gcggtgatggcgtcgcggctcgcgacgggcaacgcgctgatgccccacctgacgcgcgac
gccaatcgcgcaccgatccagagcctcggcttcgcgcccgaccatatcggcctcgtgcgc
gaagcgatgaatcaggtcgtcaacggcgcgggcaccgcgggacgcgcgcgcctgccgatc
gaggacgtcaagatggcgggcaagaccggcaccgcgcaggtcgttagcctgagcaagggg
cgcggcggcatgggcgtgccgtggaaatatcgcgaccatggcctgttcatcgcctttgcc
cccttcgacgcgccgcgctatgccgcagcggtggtgatcgagcatggcgccggctcgagt
tcggcctatccggtcgcgcgcgacgtgatgacctttctgttcgaccgcgacaaggcgatg
gcggcgctcaccgaatatgaagccggctgggggggcacgatcgaggaacggatggcgcgc
aatttcgccgcgtggaaggccggcgcggcgcagcccgatccggagcccggcgcatga
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