Sphingopyxis indica: KNJ79_08220
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Entry
KNJ79_08220 CDS
T09492
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sina
Sphingopyxis indica
Pathway
sina03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sina00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KNJ79_08220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sina03400
]
KNJ79_08220
Enzymes [BR:
sina01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KNJ79_08220
DNA repair and recombination proteins [BR:
sina03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KNJ79_08220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF4880
Motif
Other DBs
NCBI-ProteinID:
WOF44854
LinkDB
All DBs
Position
complement(1751906..1752691)
Genome browser
AA seq
261 aa
AA seq
DB search
MGGQNTALLAQSYCDWWSLAGVDALVGEAPAGWLTPPAANDAATKARPVAPAEAEPPPLP
AALQRQAPADVPETKGPVEMPADWSAFQSWLAEHPDVPGSQWDARRVLPVGDPGAPLMLL
TAWPEIDDQRDGALFAGPAGQLLDAMLHAIGTTRGECYLASLAVTRPPGGRCDAADVEAL
DRLLWHHLTLARPGRLLLIGGDIVRMAAGLALPDARGRLLEINHQGGKMAAVAVASPAML
LARPAHKAAAWDSLKLFNRGR
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgggtgggcaaaatacagccttgctggcgcaaagctattgcgactggtggtcgcttgcg
ggcgtcgatgcgctcgtcggcgaggcgccggcggggtggctgacgccgcccgcggcgaac
gatgcagcgacgaaagcacggcccgtggcacccgccgaagccgaaccgccgccccttccc
gcagccctgcaacgccaggctcccgccgacgttcccgaaaccaaaggcccggtcgagatg
ccggccgactggtcagcgttccaaagctggctcgccgaacatcccgacgttccgggcagc
caatgggacgcgcgccgcgtgctccccgttggcgatccgggcgcgccgctgatgctgctc
accgcatggcccgaaatcgacgaccagcgcgacggcgctctgttcgccgggccggcgggg
cagcttctcgacgcgatgctgcacgcgatcggcacgacgcgcggcgaatgctatctcgcg
agccttgccgtcacgcggccgccgggaggacgctgcgacgcggccgatgtcgaggcgctc
gaccgcctgctctggcatcatctgacgctcgcgcggcccggccgcctgctgctgatcggc
ggggacatcgtgcggatggcggcgggccttgccctccccgatgcgcgcggaaggttactc
gaaattaaccatcagggcggcaagatggcggcggtggcggtcgcgagccccgcgatgctg
ctcgcccggccggcgcacaaggcagccgcctgggatagcctgaaactgttcaaccgggga
cgttga
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