Sphingopyxis indica: KNJ79_09455
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Entry
KNJ79_09455 CDS
T09492
Name
(GenBank) strawberry notch family protein
KO
K26273
protein strawberry notch
Organism
sina
Sphingopyxis indica
Brite
KEGG Orthology (KO) [BR:
sina00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sina03036
]
KNJ79_09455
Chromosome and associated proteins [BR:
sina03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
KNJ79_09455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Motif
Other DBs
NCBI-ProteinID:
WOF45365
LinkDB
All DBs
Position
2008867..2013159
Genome browser
AA seq
1430 aa
AA seq
DB search
MSVPLLALAHPDEPENSTATRLFGVATRLADLLQRGRSIRRQDLKRLMEEAFRASDATGT
WSMRDAYDALEAAQVILLKSSGGWAGVDLAGTDAFASLRRFERALPTQTYRSEHQVEMQQ
FSTTISLAWLAAQAARIRPDDRVLEPSAGTGMLAVHAFGVGAALSLNERDSYRAALLGKL
LGVPVTTHDAEFLNDLLPAGDSPSVVLMNPPFSRSEGRGKDRFAGARHLRSALLRLVPGG
RCVAIMPPSFAADGTGATGYAMVCETTNPRVEITILGNPYAKHGTSIAIRLIIFDKGWAG
PTERLTAQSIEEAETLVTAVPPRLVVPEPEPPAPAVIPLRPRRAMMPSPSTIFGGIQKRA
LVAPDRIAADGSARPVDYAIRATPLPAGDPVGHYAPWRPARIDIPNARPHPDQLVESVAM
ASVLPPAPSYRPMFQPQAFAALSDAQLETIIHAGEACDRDLKGTFAPNKAGDQLHEDPDG
AVYRTGFFIADGTGVGKGREGAGIILDQWNRGRRRAIWISRSSALIEDARRDWSALGGVP
IDIQPLDAFPLGEPVGMASGIVFLTYATLRSQRHDRASRLQQLLDWAGPDFDGVILLDES
HALGNAAGTETEFGAAKGSEQGLAGVRLQIALPRARVIYVSATGATKPENLSYTARLGLW
GPGTAFRDRDAFLAAMEEGGIAAMEIVARDTKAMGLYTARALSFAGVEYDPLEHKLTLAQ
IEIYDAYADAWAVIHRNVDAALKAANIVDRASGRTLNAMAKGSALSRFESSKQRFWSALL
ISMKMPTVFEAIETEISAGNVAVVQLVSTAEAILDRRLAELSPEERAHLDLELSPRATMI
DYLKNAFPTQQMRVFSTSDGSLRSEPMRDEAGNMVECAEAIATRDALIEELCAMPPVPAA
LDALLAHFGTAKVAEVTGRSRRIVIGSDGSQKLERRGARANLSETQAFMDGQKPILVFSD
AGGTGRSYHADLACGTADKRRVHFLLEPGWRADVAIQGLGRTHRTNQSTPPVFRPVTTDC
KGERRFISTIARRLDSLGALTRGQRQTGGQNLFDPADNLESDYAREALTQWYHLLHGNKL
SSVTMESFQTMTGLKLTDEDGTLLEKLPPIQRWLNRILALRIATQNAIFDEYMGLIQARI
DAAREAGTLDVGVETIRAEQIITRSEQTLRTDPVTGAETRLLRLELHLRPRVMHWKRLMQ
IWDGTREIAYLWNSRSKRVALKVPSWSITDEEGRIVPMCQLVRPTGGTRMQEIAMWASLW
KEIDRDEFQKLWETEAAEAEAKVDIETVNVATGLLLPVWHRLPQDDVRVWRIDDGQGISI
IGRLIPPAAMAELQSAFGLDGAVELTAAELGAAAQKGTGVAIPGLGGATLATALVNGSRR
LEIRNYRPEDRERLKTRGVFSEVIQYKTRLFIPLDRSSEIIEAILAMSRI
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttcctctccttgctctcgcgcatcccgacgagcccgaaaattccaccgctacg
cgtctgttcggcgtcgctacccggctagccgaccttctccaacgtgggcgctcaatccgc
cgccaggacctcaagcgcctcatggaggaagccttcagggcctccgacgcgacaggcacc
tggtcgatgcgcgatgcctatgacgcgcttgaggccgcacaggtcatcctcctcaaatcg
tcgggtggctgggccggcgtcgatctggccggcactgatgcattcgcctcgcttcgccgc
ttcgaacgcgctctcccgacccagacctatcgcagcgagcatcaggtggagatgcagcag
ttcagcacaacgatctcgctcgcctggctcgccgcacaggccgcgcgaatccgcccggac
gatcgggtgcttgaaccatctgcgggcaccggcatgctagccgtccacgccttcggggtc
ggcgccgcactgtccctcaacgagcgcgactcctatcgcgccgcgctgctcggcaagctg
ctcggtgtgcctgtcacgacccacgatgccgaattcctcaacgacctgctacctgccggc
gattccccaagcgtcgtgctgatgaacccgcccttcagccggagcgaaggtcggggcaag
gaccgcttcgcgggcgcccgtcatctgcgttccgcgctactccgcctggtgccgggcggg
cgctgcgtcgcgatcatgccacccagcttcgcggcggacggcactggcgccaccggctat
gcaatggtttgcgagaccacgaacccgcgtgtcgagatcaccatccttggtaacccctat
gccaagcatggcaccagcatcgccatccggctgatcatcttcgacaaaggctgggcaggg
ccgacagagcgcttgaccgcccaatccatcgaggaggccgagaccctggtcacagccgtt
ccgccgcgccttgtcgttcccgagccggagcccccagcgccagccgtcattcccttgcgt
ccgcgccgtgccatgatgccgtcgccatcgacgatcttcggtggcatccagaagcgcgcg
ctggttgcgcccgaccgcatcgccgcggatggaagcgccagacccgttgactatgcgatc
cgggccacgccgctgccagcgggcgaccctgtcgggcattacgccccctggcggcccgcg
cgcatcgatatccccaacgccaggccccacccggaccaactggtggagtcggttgcgatg
gcatccgtgctaccgcccgcgcccagctatcgcccgatgttccagccgcaggccttcgcc
gccctgtccgatgcccagctcgagacgatcatccacgctggcgaagcatgtgaccgcgat
ctcaagggcaccttcgcgcccaacaaagcgggcgaccagctgcacgaggatcctgacggt
gccgtttaccggacaggcttcttcatcgctgatggcactggtgtcggcaaaggccgtgaa
ggcgcaggcatcatcctcgaccaatggaaccgcggccgccgccgggcgatctggatctcc
cgcagttcggccttgatcgaggacgcaaggcgggactggagtgcgcttggcggcgtcccg
atcgatatccaaccgctcgatgcatttcctctcggcgaacccgtcggcatggccagcgga
atcgtcttcctcacctatgcgacgctgcgctcccagcgccatgaccgcgcgtcgcgcctg
cagcaattgctcgactgggcgggacctgatttcgacggcgtcatcctgctcgacgaatcg
catgcgctcggcaatgccgccggcaccgagaccgagtttggcgccgccaaagggtccgaa
cagggcctcgccggcgtccggctgcaaatcgcgttgccgcgtgcccgggtcatctacgtc
tcagcgaccggcgcgaccaagccggaaaatctgagctacaccgcgcggctcggcctctgg
ggaccgggcaccgccttccgcgaccgagacgctttcctcgccgcgatggaagagggcggc
atcgcggcgatggagatcgtcgcgcgcgataccaaggccatgggcctctacacggcccgc
gcgctcagtttcgccggcgtcgaatatgacccgcttgagcataagctgaccctcgcccag
atcgagatttacgatgcttatgctgacgcctgggccgtcatacatcgcaacgtcgatgca
gcgttgaaagccgccaatatcgtcgatcgcgcctcgggtcggacgctgaacgccatggcg
aaggggtcggcgctcagccggttcgaaagctccaagcagcgcttttggtcggccttgctc
atctcgatgaagatgccgacggtcttcgaggcgatcgaaaccgaaatctcggccggcaat
gttgccgtcgtccaactcgtcagcaccgcagaagcgatcctcgacaggcggcttgccgaa
ctctcgcctgaagaacgcgcccatctcgatctggagctctcgccgcgagcgaccatgatc
gactacctcaaaaacgccttcccgacccagcagatgcgcgttttctccaccagcgacgga
tcgctccggtcagaaccgatgcgcgacgaagcgggcaatatggtcgagtgcgcggaagcc
atcgcaacgcgcgatgcgctgatcgaggaactctgcgccatgcctccggttccggcggcc
ctcgatgctctgctcgcccattttgggacggcaaaagtcgccgaggtaaccggccggtcg
cggcgcatcgtcataggcagcgacggttcccagaagctcgaacggcgcggcgcacgcgcc
aatctctccgagacccaggcgttcatggatgggcagaagccaatcctggtcttctccgac
gcaggcggcacgggccgttcctatcatgccgatctcgcctgcgggacggccgacaagcgc
cgcgtccatttcctgctggagccgggctggcgcgccgatgtcgcaatccagggcctgggg
cgcacccatcgcaccaatcagagcacgccgccggtattccggccggtgacaaccgactgc
aagggcgagcgacgcttcatctcgacgatcgcgcggcgtctcgacagcctgggcgcactg
acacgcggccagcgccagacaggcggccaaaacctgttcgatccggcggataatctggaa
agcgactatgcccgggaagccctaacccaatggtatcatcttctccatggcaataagctc
tcgagcgtgaccatggagagtttccagaccatgaccgggctcaagctcaccgacgaggac
ggcacacttctcgaaaagctgccgccgatccagcgctggctcaaccgcatcctcgcgctc
aggatcgcgacccagaacgcgatcttcgacgaatatatggggctcatccaggcgcgcatc
gacgcggcgcgcgaagcaggcacgcttgacgtcggggtcgagaccatccgcgctgagcag
atcatcacccgatccgaacagacactgcgcaccgatccggtgaccggtgccgagacccga
ttgctgcggctcgagcttcatctgcgcccgcgcgtgatgcactggaagcggctgatgcag
atctgggacggcacgcgtgaaatcgcttatctctggaacagccggtccaaacgcgtcgct
ctcaaggtgccgtcctggtcgatcaccgacgaggaagggcgcatcgtgcccatgtgccag
cttgttcgtccgaccggcgggacgcgcatgcaggagatagcgatgtgggccagcctctgg
aaggagatagaccgcgacgagttccagaagctttgggaaaccgaagcagccgaggccgag
gccaaggtcgatatcgagaccgtcaacgtggcgactggcctcctcctgccggtttggcac
cgacttcctcaggatgatgtccgcgtctggcggatcgatgatggccagggaatttcgatc
atcgggcgcctgatcccaccagcggcgatggcggaactgcaatcagccttcggtctcgac
ggcgcggtcgaactgaccgctgccgaacttggcgccgcggcccagaaagggacgggcgtt
gcgatcccaggcctgggcggcgcgaccttggcaaccgcgctcgtcaacggctcgcgccgg
ctcgaaatccgcaactaccggccggaagaccgcgagcgattgaagacacgtggcgtgttc
agcgaggtcattcagtacaagacccggctattcattccgctcgaccggtcgagcgagatc
atcgaggcaatcctggcgatgtcgcggatctga
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