Sphingopyxis indica: KNJ79_10540
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Entry
KNJ79_10540 CDS
T09492
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
sina
Sphingopyxis indica
Pathway
sina03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sina00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KNJ79_10540 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sina03400
]
KNJ79_10540 (recO)
DNA repair and recombination proteins [BR:
sina03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KNJ79_10540 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KNJ79_10540 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
WOF41701
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All DBs
Position
2222007..2222744
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AA seq
245 aa
AA seq
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MASLSAEAIVCAVRAHGEHGAILRALTREAGLVAGYVRGGRSRRLRPILMPGNAVAFELR
ARTEEQLGGATVELLTSRAPLLAEPLPAAAIDWATSLTAATLPEGQPYPALYDALGGLLD
AVAVAAAARQWAAALARYELLLLAELGFGLNLDECVATGASDGLAFVSPKTGGAVSAAAA
QGYETRLFRLPPFLRAPDPDPSLADVLDALAITGHFLGRDLLDGRNRDLLAVRERLTVRL
NRAVA
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
ttggccagcctgagcgccgaggcgatcgtctgcgcggtgcgcgcgcatggcgaacatggc
gcgatcctgcgcgcgctgacgcgcgaagcggggcttgtcgcgggctatgtgcgcggcgga
cggtcacggcggttgcggccgatcctgatgcccggaaacgcggtcgcgttcgagctgcgc
gcgcgaaccgaggaacagctcggcggcgcgacggtggagctgctgactagccgcgcgccg
ctgctcgccgaaccgctgcccgccgcggcgatcgactgggcgacgagcctgaccgcggcg
acgctgcccgagggccagccctatccggcgctctacgacgcgcttggcggcctgctcgac
gcggtcgcggttgcggctgcggcgcggcaatgggcggcggcgctcgcgcgctacgaactg
ctgctgctcgccgaactcggcttcgggctcaaccttgacgagtgcgtggcgacgggtgcg
agcgacggtctcgctttcgtcagccccaaaaccggcggggcggtaagcgccgccgcggcg
cagggctatgaaacgcggctgtttcgcttgccgcccttcctgcgcgcacccgatcccgac
ccgtcgctcgccgacgtgttggacgcgcttgcgatcaccggccattttttgggtcgcgac
ctgctcgacgggcgcaaccgcgacttgctggcggtgagggaaagattgaccgttcggctc
aacagggcggttgcgtga
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