Sphingopyxis indica: KNJ79_10905
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Entry
KNJ79_10905 CDS
T09492
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
sina
Sphingopyxis indica
Pathway
sina00550
Peptidoglycan biosynthesis
sina01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sina00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KNJ79_10905
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sina01002
]
KNJ79_10905
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sina01011
]
KNJ79_10905
Enzymes [BR:
sina01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
KNJ79_10905
Peptidases and inhibitors [BR:
sina01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
KNJ79_10905
Peptidoglycan biosynthesis and degradation proteins [BR:
sina01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
KNJ79_10905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
PBP5_C
Beta-lactamase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
WOF41768
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Position
2298532..2299713
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AA seq
393 aa
AA seq
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MFAAAALTLALPATSASGTVAHAPASRPLYTTAAPVAMLKDMDSGAILFERGADKRFAPA
SMAKVMTAYVVLDLIDSGKLSRGAIFTVDQKTYDKWNGSNGGSTMFLRAGEKVSVDELLK
GLITVSGNDAAAVLAVGIDGSEEVFVNRMNTMAKLLGMTSSHFGTPNGWPDGGVTKVSAA
DLITLADRLIRDHPGGYARYFSIPRLQHGTAPDGTPIVQPNRNPILGNIEGADGLKTGHT
SEAGYCFLGSAKRNGRRLILVVAGMDSEKARRDEAERLMRWGFEAWEGRELVPAHAKVGH
LDVGQGDAPTVAAEAAIPVRMTVPKGYEGGFRATMRARAPLAAPVDKGARIAELIVTPDG
LPPQATPLLAANNVGKGDGWDRLRTGFYRLTGW
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
ttgttcgcagcggcggctctgacccttgcccttccggcgacatcggcgagcggcaccgtc
gcccatgcgcccgccagccgtccgctctataccaccgccgcacccgtcgcgatgctcaag
gacatggattcgggcgcgatcctgttcgaacgcggcgcggacaagcggtttgcgcccgcc
tcgatggcaaaggtgatgaccgcctatgtcgtgctcgatctgatcgacagcgggaaattg
tcgcgcggcgcgatctttacggtcgaccagaagacctatgacaaatggaacggcagcaat
ggtggttcgaccatgttcctgcgcgccggcgaaaaagtctcggtcgacgaactgctcaag
gggctgatcaccgtttcgggcaatgacgcggcggcggtgctggcggtgggcatcgacggc
agcgaagaggttttcgtcaatcgaatgaatacaatggccaagctccttgggatgacgtcg
agccatttcggcacgcccaacggctggcccgacggcggcgtgaccaaggtgagcgccgcc
gatctgatcacgctcgccgaccggctgatccgcgatcatcccggcggctatgcgcgctat
ttctctataccgcgtctccagcacggcacggcgcccgacggcacgccgatcgtccagccg
aaccgcaatccgatcctcggcaacatcgaaggcgccgacggattgaagaccgggcacacg
agtgaggcgggctattgctttctcggctcggcaaagcgcaatggccgacgtctgatcctc
gtggtggcgggaatggacagcgaaaaggcgcgccgcgacgaagccgaacggctgatgcgc
tgggggttcgaggcatgggaagggcgcgaactcgtcccggcgcatgcaaaggtcgggcac
ctcgacgtcgggcagggcgatgcccccacggtcgcggccgaggcggcgatcccggtgcga
atgacggtgcccaagggatatgagggcggcttccgcgcgacgatgcgcgcccgcgcgccg
ctggccgccccggtcgacaagggtgcgcgcatcgccgaattgatcgtcacgcccgacggt
ctgccgccgcaggcgaccccgctgcttgcggcgaacaatgtggggaagggcgacggttgg
gatcgcctgcgcaccggcttttaccggctgacgggatggtga
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