Sphingopyxis indica: KNJ79_11720
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Entry
KNJ79_11720 CDS
T09492
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sina
Sphingopyxis indica
Brite
KEGG Orthology (KO) [BR:
sina00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sina03032
]
KNJ79_11720
03036 Chromosome and associated proteins [BR:
sina03036
]
KNJ79_11720
03400 DNA repair and recombination proteins [BR:
sina03400
]
KNJ79_11720
DNA replication proteins [BR:
sina03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KNJ79_11720
Chromosome and associated proteins [BR:
sina03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
KNJ79_11720
DNA repair and recombination proteins [BR:
sina03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
KNJ79_11720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
DUF2267
Peptidase_M35
MSP1_barrel
KORA
Motif
Other DBs
NCBI-ProteinID:
WOF41908
LinkDB
All DBs
Position
complement(2460823..2461095)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKQDLIATVADSSGLTKGDASKAVEAVFDAITASLKKGGEVRLVGFGTFSVSKRKASTG
RNPRTGETMTIAASNQPKFKAGKALKDACN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacaagacctgatcgccaccgtcgctgactcgagcggcctcaccaagggcgat
gcgagcaaggcggttgaagccgttttcgacgcgatcaccgcgtcgctgaagaagggcggc
gaagtccgtctcgtcggcttcgggacgttctcggtcagcaagcgcaaggcgtcgacgggt
cgcaacccgcgcaccggcgaaacgatgaccatcgcggcgtcgaaccagccgaagttcaag
gccggcaaggccctcaaggacgcctgcaactaa
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integrated database retrieval system