KEGG   Sphingopyxis indica: KNJ79_11720
Entry
KNJ79_11720       CDS       T09492                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
sina  Sphingopyxis indica
Brite
KEGG Orthology (KO) [BR:sina00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sina03032]
    KNJ79_11720
   03036 Chromosome and associated proteins [BR:sina03036]
    KNJ79_11720
   03400 DNA repair and recombination proteins [BR:sina03400]
    KNJ79_11720
DNA replication proteins [BR:sina03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    KNJ79_11720
Chromosome and associated proteins [BR:sina03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    KNJ79_11720
DNA repair and recombination proteins [BR:sina03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      KNJ79_11720
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 HU-CCDC81_euk_1 DUF2267 Peptidase_M35 MSP1_barrel KORA
Other DBs
NCBI-ProteinID: WOF41908
LinkDB
Position
complement(2460823..2461095)
AA seq 90 aa
MNKQDLIATVADSSGLTKGDASKAVEAVFDAITASLKKGGEVRLVGFGTFSVSKRKASTG
RNPRTGETMTIAASNQPKFKAGKALKDACN
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaaacaagacctgatcgccaccgtcgctgactcgagcggcctcaccaagggcgat
gcgagcaaggcggttgaagccgttttcgacgcgatcaccgcgtcgctgaagaagggcggc
gaagtccgtctcgtcggcttcgggacgttctcggtcagcaagcgcaaggcgtcgacgggt
cgcaacccgcgcaccggcgaaacgatgaccatcgcggcgtcgaaccagccgaagttcaag
gccggcaaggccctcaaggacgcctgcaactaa

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