Sphingopyxis indica: KNJ79_12780
Help
Entry
KNJ79_12780 CDS
T09492
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
sina
Sphingopyxis indica
Brite
KEGG Orthology (KO) [BR:
sina00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sina03021
]
KNJ79_12780
Transcription machinery [BR:
sina03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KNJ79_12780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
WOF42089
LinkDB
All DBs
Position
2701843..2702475
Genome browser
AA seq
210 aa
AA seq
DB search
MTRPQAATQPKEEDNLSDSEFKALLADVIPHLRAYGRSLCGNPDLADDLTQDTMVKAWAS
RDRFERGTSIKAWTFVILRNTFLSQMRRNKFKGEYDEGVVERTLSTPAAQEDSGDMADLQ
RGLMELPQDQREALILVGAGGMSYEEAAQICDCALGTMKSRVSRARTALEEIMSRGQFSQ
KRSDAAPASEAVSAIMDSVEEIAARREAER
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcccccaagctgcgacgcagccgaaagaagaagacaatctttccgacagcgaa
ttcaaggcgttgcttgccgacgtcattccgcatctgcgcgcctatggccgcagcctgtgc
ggcaatcccgatcttgccgacgatctgacgcaggacacgatggtcaaggcgtgggcctcg
cgcgaccgcttcgagcgcggcacctcgatcaaggcgtggaccttcgttatcctccgcaac
accttcctctcgcagatgcgccgcaacaagttcaagggcgagtatgacgagggcgtcgtc
gagcgcacgctgtcgacccccgcggcgcaggaggattcgggcgacatggccgaccttcaa
cgcgggctgatggaattgccgcaggaccagcgcgaggcgctgatcctcgtcggcgccggc
ggcatgtcctatgaggaagcggcgcagatctgcgactgcgcgctcggcaccatgaagagc
cgggtgtcgcgcgcgcgcaccgcgctcgaagagattatgagccgcggccaattctcgcag
aaacgctccgatgccgctccggccagcgaggcggtcagcgcgatcatggacagtgtcgag
gaaatcgccgcgcggcgcgaagccgagcgctga
DBGET
integrated database retrieval system
