Sphingopyxis indica: KNJ79_12980
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Entry
KNJ79_12980 CDS
T09492
Name
(GenBank) AMP-dependent synthetase/ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sina
Sphingopyxis indica
Pathway
sina00061
Fatty acid biosynthesis
sina00071
Fatty acid degradation
sina01100
Metabolic pathways
sina01212
Fatty acid metabolism
sina02024
Quorum sensing
sina04146
Peroxisome
Module
sina_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sina00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
KNJ79_12980
00071 Fatty acid degradation
KNJ79_12980
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
KNJ79_12980
09145 Cellular community - prokaryotes
02024 Quorum sensing
KNJ79_12980
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sina01004
]
KNJ79_12980
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sina04147
]
KNJ79_12980
Enzymes [BR:
sina01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
KNJ79_12980
Lipid biosynthesis proteins [BR:
sina01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
KNJ79_12980
Exosome [BR:
sina04147
]
Exosomal proteins
Exosomal proteins of breast milk
KNJ79_12980
Exosomal proteins of breast cancer cells
KNJ79_12980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Cap17-like_N
MazE_antitoxin
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
WOF42125
LinkDB
All DBs
Position
complement(2737009..2738838)
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AA seq
609 aa
AA seq
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MKLDNPHLDHFPSLVAMFFDRAERGGEDPFLWRKADRVWQPLSWRQVANQVAALAHNLRR
LGLKEGDRVVLVSENRPEFCIADLAIMAAGCITVPTYTTNTERDHQHILDNSGARAVIVS
TAKLARTLMPAVMRSNASLVISMEPLRVGQQGEVEVHDWAPLVTGGEAHVDEAKAHGLAM
SRDDIACLIYTSGTGGAPRGVMQHHGAILHNAAGAAEILVNDFGIGDEEVFLSFLPLSHA
YEHSGGQFLPIMVGAQIYYSEGLEKLVSNIEETKPTIMVVVPRLFEVIRARMIKSVEKQG
KLANWMLAQALRIGEKDYERRMGLIDRPVDLLLNKLFRPKIQQRFGGRMKALVSGGAPLN
PEIGVFFHSIGLTLLQGYGQTEAGPVISCNRPKTGLKMDTVGPPLMNTEVRIADDGEICV
RGELVMKGYWRNEAETQRVLIADPADPDGAPWLHTGDIGHIDEAGRIVITDRKKDLIVND
KGDNVSPQRVEGMLTLQPEILQAMVYGDKRPHLVAILVPDPEWMAEWAEAEGLPKELERL
REHEKFRTAIREAVDRVNGQLSVIEKVRKFDFADEAFSIENEQMTPSMKIRRHILRDVYA
DRIAALYRG
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgacaacccgcatctcgaccattttccgagtctggtcgcgatgttcttcgac
cgcgccgaacggggcggcgaagacccgttcctgtggcgcaaggccgaccgggtgtggcaa
ccgctcagctggcggcaggtcgcgaaccaggtcgcggcgctcgcgcataatctgcggcgg
ctggggctgaaggagggcgaccgggttgttctcgtcagcgagaaccggcccgaattctgc
atcgccgaccttgcgatcatggccgccgggtgcatcaccgtgccgacctacacgacgaat
accgagcgcgatcaccagcatatcctcgacaacagcggcgcgcgcgcggtgatcgtctcg
accgcgaagcttgcgcgcacgttgatgcccgcggtgatgcgctcgaacgccagcctcgtc
atcagcatggagccgctgcgcgtcggccagcagggcgaggtcgaggtccacgattgggcg
ccgctcgtcaccggcggcgaggcgcatgtcgacgaagcgaaagcgcacggccttgcgatg
tcgcgcgacgacatcgcctgcctgatctacaccagcggcaccggcggcgcgccgcgcggg
gtgatgcagcaccatggcgcgatcctgcacaacgcggcgggcgcggccgaaatcctggtc
aacgacttcgggattggcgacgaagaggtgttcctctctttcctgcccctgagccacgcc
tatgaacattcgggcggccagttcctgccgatcatggtcggcgcgcaaatctattacagc
gaggggctcgaaaagctcgtatcgaacatcgaggagacgaagccgacgatcatggtcgtc
gtcccgcgtctgttcgaggtgatccgcgcgcggatgatcaagtcggtcgagaaacagggc
aagctcgcgaactggatgctcgcccaggcgctgcgcatcggcgaaaaagattatgagcgg
cgcatggggctgatcgaccggccggtcgatcttctcctcaacaagctgttccggccgaaa
atccagcaacgcttcggggggcggatgaaggcgctggtgtcgggcggtgcgccgcttaat
cccgagatcggcgtgttcttccactcgatcgggctgaccctgctgcaaggctatggccag
accgaagcggggccggtgatcagctgcaatcgccccaagaccgggctcaagatggatacc
gtcggcccgccgctgatgaacaccgaagtgcgcatcgccgacgacggcgaaatctgcgtg
cgcggcgagctggtgatgaagggttattggcgcaacgaggccgaaacgcagcgcgtgctg
atcgccgatccggccgatcccgacggcgccccctggctgcacaccggcgacatcgggcat
atcgacgaagcggggcgtatcgtcatcaccgatcgcaagaaggatctgatcgtcaacgac
aagggcgacaatgtctcgccgcagcgcgtcgaggggatgctgaccctccagcccgaaatc
ctccaggcgatggtctatggcgacaagcgcccgcatctcgtcgcgatcctcgtccccgac
cccgagtggatggccgaatgggcggaggccgaggggctgcccaaggagctcgagcgcctg
cgcgagcacgagaaattccgcaccgcgatccgcgaggcggtcgaccgcgtcaacggccag
ctgtcggtgatcgaaaaggtgcgcaagttcgacttcgccgacgaagccttcagcatcgag
aatgagcaaatgacgccgtcgatgaagatccgccgccacatcctgcgcgacgtctatgcc
gacaggatcgcggcgctctatcgggggtag
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