Sphingopyxis indica: KNJ79_13870
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Entry
KNJ79_13870 CDS
T09492
Name
(GenBank) LysR family transcriptional regulator
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
sina
Sphingopyxis indica
Brite
KEGG Orthology (KO) [BR:
sina00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sina03000
]
KNJ79_13870
Transcription factors [BR:
sina03000
]
Prokaryotic type
Helix-turn-helix
LysR family
KNJ79_13870
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
dnstrm_HI1420
Motif
Other DBs
NCBI-ProteinID:
WOF42282
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Position
complement(2950353..2951501)
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AA seq
382 aa
AA seq
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MDWSFPNIRHMAALVATARSGSVTRAARQINLTQPALTQAIAGLERELDCTLFERAPDGM
KPTEPALLLIARAETALALIGSWRVTSTQLRAFLAVAGAGGYAGAAEETGLAAASLHRAV
SDLTVALGQRLIEKRGRTIALTPAGLRRARAFGLARAELRSGLDEVARWQGKAAGSVTIG
AMPLSRSRWLPQVLLIFARAYPDVGVRVVEGSHSDLSPALRDGEIDMLLGAVRDGPGVED
LVQEAVFDDRPRLVCRTGHPLAKCCDPQELAKYDWVMPGPDTPLRHYWQDMFAALGLDAP
EVKITCGSILTIRELLIASDMMSMASPAQLRVELQAGLLVAIEPPVPVMRRIGITTRIGW
RPTEPQAAMLDLLREKGRLDLS
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggactggtcctttcccaacatcaggcacatggccgcgctggtcgccacagcccgctcg
ggcagcgtcacgcgggccgcccgccagatcaatctgacccagccggccttgacgcaggcc
atcgcaggtctggagcgtgagctggactgtaccttgttcgaacgtgccccggacggaatg
aagcccaccgaacccgcattattgttgatcgcgcgcgccgaaacggcgctggcgctgatc
ggatcatggcgcgtcacgtcgacccagctgcgcgcctttctcgccgtcgcgggcgccggg
ggctatgcgggggcggcggaagagaccgggctggcggcggcttcgctgcatcgtgcggtt
tccgacctgacggtcgcactgggccagcgcctgatcgaaaagcgcgggcgcacgattgcg
ctgacgcctgcgggcctgcgccgcgcccgggccttcggactggcacgcgccgaattgcgc
agcggcctggacgaggttgcgcgctggcagggcaaggcggcgggatcggtgacgatcggt
gccatgccgctgtcgcgttcacgctggctgccgcaagtgctgctgatctttgcacgggcc
tatcccgatgtcggcgtgcgcgtggtagaggggagccactccgatctctctccggccctg
cgcgatggtgagatcgacatgcttctgggcgcagtgcgggacgggccgggggtcgaggac
cttgtccaggaagcggttttcgacgaccggcctcggctcgtctgtcgcaccggtcatccg
cttgcgaagtgctgcgacccgcaggaactggccaaatatgactgggtgatgcccggaccc
gatacgccgcttcggcattactggcaggatatgttcgccgcgctggggttggacgcgccc
gaagtgaagatcacctgcggttcgatcctgacgatccgcgaactgctgatcgccagcgac
atgatgagcatggcttcgcctgcgcagcttcgggtcgagctgcaggcagggttgctggtg
gcgatcgagccgcccgttcccgtgatgcggcggatcgggatcaccacgcgcatcggttgg
cgtccgaccgagccgcaagcggccatgctcgacctgttgcgcgaaaagggaagactcgat
ctttcgtaa
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