Sphingopyxis indica: KNJ79_14335
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Entry
KNJ79_14335 CDS
T09492
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
sina
Sphingopyxis indica
Pathway
sina00220
Arginine biosynthesis
sina00240
Pyrimidine metabolism
sina00250
Alanine, aspartate and glutamate metabolism
sina01100
Metabolic pathways
sina01110
Biosynthesis of secondary metabolites
sina01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sina00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
KNJ79_14335 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
KNJ79_14335 (carB)
00220 Arginine biosynthesis
KNJ79_14335 (carB)
Enzymes [BR:
sina01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
KNJ79_14335 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_3
ATP-grasp_4
ATP-grasp_5
MucBP_2
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
WOF42363
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Position
complement(3065169..3068501)
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AA seq
1110 aa
AA seq
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MPKRTDIQSILVIGAGPIVIGQACEFDYSGTQAIKALKEEGYRIVLVNSNPATIMTDPDL
ADATYVEPITPEIVAKIIEKETTAFPGGWAVLPTMGGQTALNTALALFNDGTLTKYGVEM
IGADAEAIDKAEDRQKFRDAMDKIGLESARSGVAHTLDEAFAVLERTGLPAIIRPSFTLG
GTGGGIAYNREEFEHIVRGGLIASPTTEVLIEESLLGWKEYEMEVVRDRNDNCIIICSIE
NVDPMGVHTGDSITVAPALTLTDKEYQIMRSASIAVLREIGVETGGSNVQFAVNPKDGRL
IVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDEIMNDITGVTPASFEPTIDYVV
TKIPRFAFEKFKGSEPLLSTAMKSVGEVMAIGRTIHESLQKALRGLETGLSGFNFVDRLA
GASYEQLKSELARRTPDRLLNTAQAIREGLALEEINRIAGYDMWFLERIAEIVAAENAVM
KDGLPRDAEGLRKLKAMGFSDKRLAYLALQSAHLRNGGRGVAHGTGLIHETVKAMTGGVT
EAEVRALRHKLGVRPVYKTIDTCAAEFRAQTPYLYSTYEAPSFGEPENEANPSDRKKVVI
LGGGPNRIGQGIEFDYCCCHACFALDEVGYETIMVNCNPETVSTDYDTSDRLYFEPLTVE
DVLEILHVEMSKGTLAGVIVQFGGQTPLKLAGALEEAGIPILGTSPDAIDLAEDRERFAA
LVNRLGLKQPENGIARSREEAIAVASRIGYPVLTRPSYVLGGRAMEIVDDQAQLENYIET
AVQVSGDSPVLIDRYLRDAIEVDVDALCDGTDVVVAGVLQHIEEAGVHSGDSACSIPPYS
LPAGIIAEIERQTDALARALGVRGLMNVQYAVKDGEVYLIEVNPRASRTVPFVAKAVGSP
IAKIAARVMAGEKLADLPKINRDIKHVAVKEAVFPFARFPGTDPVLSPEMKSTGEVMGID
SDFNLAFAKAQLGAGDRLPTDGRLFVSVKDSDKPRIVPAVRKLADRGWQVIATGGTADYL
AGQGIAVERVNKVAEGRPHIVDRIKDGDVQLIFNTTEGWQSLQDSQSIRASALAADIAYY
TTAAASEAAAEAIGALRARSLEVKPLQDYY
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaagaaccgacatccaatccatcctcgtcatcggcgccggcccgatcgttatc
ggtcaagcgtgcgagttcgactattcggggacgcaggcgatcaaggcgctgaaggaggag
ggctatcgcatcgtcctcgtcaactccaacccggcgacgatcatgaccgatcccgacctc
gccgacgccacctatgtcgagccgatcacgcccgagatcgtcgcgaagatcatcgaaaag
gagaccaccgcgtttccgggtggttgggcggtgctgccgacgatgggcgggcaaaccgcg
ctcaacaccgcgctcgcgctgttcaacgacggcaccttgaccaaatatggcgtcgagatg
atcggcgccgatgccgaggcgatcgacaaggccgaggaccggcagaagttccgcgacgcg
atggacaagatcgggctggaaagcgcgcgctcgggcgtcgcgcacacgctcgacgaagcc
ttcgcggtgctcgaacgcaccgggcttcccgcgatcatccgtccgtccttcaccttgggc
ggcaccggcggcggcatcgcgtataaccgcgaggaattcgagcatatcgtccgcggcggc
ctgatcgcctcgccgaccaccgaagtcctgatcgaggaatcgctcctcggctggaaagaa
tatgagatggaggtggtgcgcgaccgcaacgacaattgcatcatcatctgttcgatcgag
aatgtcgatccgatgggcgtccacacgggcgacagcatcaccgtcgcccctgcgctgacg
ctgaccgacaaggaatatcagatcatgcggagcgcgagcatcgcggtgctgcgcgagatc
ggggtcgagacgggcgggtcgaacgtccagttcgcggtcaatcccaaggacggccgcctg
atcgtgatcgagatgaacccgcgcgtgtcgcgctcgtcggcgctggcgtcgaaggcgacg
ggtttcccgatcgccaaggtcgcggcgaagctcgcggtcggctacacgctcgacgagatt
atgaacgacatcaccggcgtgaccccggcgtcgttcgagccgacgatcgactatgtcgtc
accaagatcccgcgcttcgccttcgaaaaattcaaggggtccgaacccctgctctcgacc
gcgatgaagtcggtgggcgaggtgatggcgatcggccgcacgattcacgaatcgctgcaa
aaggcgctgcgcgggctggagacgggcctctcgggcttcaacttcgtcgaccggctcgcc
ggcgcgagctacgagcaattgaagagcgaactcgcgcggcgcactcccgaccggctgctc
aatacggcgcaggcgatccgcgaagggctggcgctcgaggagatcaaccgcatcgcgggc
tatgacatgtggttcctcgaacgcatcgccgaaatcgtcgccgccgaaaatgcggtgatg
aaggatggcttgccgcgcgacgccgaaggcttgcgcaagctcaaggccatgggcttttcg
gacaagcggctcgcttatctggcgctccagtcggcgcatcttcggaacggcgggcgcggc
gtcgcgcacggcaccgggctgatccacgaaacggtcaaggcgatgaccggcggtgtcacc
gaggcagaggtgcgcgcgctacgtcataaactcggcgtgcgccccgtctacaagacgatc
gacacctgcgccgccgaatttcgtgcgcagaccccctatctctattcgacctatgaagcg
ccgagctttggcgagcccgagaatgaagccaatccgtccgaccgcaaaaaggtcgtgatc
ctgggcggcgggccgaaccggatcgggcaggggatcgagttcgactattgctgctgccac
gcctgcttcgcgctcgacgaggtcggctatgaaacgatcatggtcaactgcaaccccgaa
acggtgtcgaccgattatgacacgtcggaccgcctctatttcgagccgctgaccgtcgag
gatgtgctcgaaatattgcacgtcgaaatgtcgaagggcacgctcgccggggtgatcgtc
cagttcggcggccagacgccgctcaagctcgcgggcgcgctcgaggaagcgggtatcccg
atcctcggcacctcgcccgacgcgatcgacctcgccgaagaccgcgaacgctttgcggcg
ctcgtcaacaggctgggcctgaagcagcccgagaacggcatcgcgcgcagccgcgaggaa
gcgatcgcggtcgcgtcgcgcatcggctatccggtgctcacgcggccctcctatgtcctt
ggcggccgcgccatggagattgtcgacgaccaggcgcagctcgaaaactacatcgagacc
gcggtgcaggtgtcgggggattcgccggtgctgatcgaccgctatctgcgcgacgcgatc
gaggtcgacgtcgatgcgctgtgcgacggaaccgatgtcgtcgttgcgggcgtgctccag
catatcgaggaggccggcgtccattcgggcgacagcgcctgctcgatcccgccctacagc
ctgcccgccggcatcatcgccgagatcgagcgccagaccgacgcgctcgcgcgcgcgctt
ggcgtgcgcgggctgatgaatgtgcaatatgcggtgaaggacggcgaagtctatctgatc
gaggtcaacccgcgcgcgagccgcacggtgcccttcgtcgccaaggcggtcggatcgccg
atcgccaagatcgcggcgcgggtgatggcgggcgagaagctcgccgacctgccgaagatc
aaccgcgacatcaagcatgttgcggtgaaagaggcggtctttcccttcgcgcgctttccc
ggcaccgacccggtgctgagccccgagatgaagtccaccggcgaagtcatgggaatcgac
agcgatttcaacctcgcctttgcgaaggcgcagctcggcgcgggcgaccgcctgccgacc
gacgggcggctgttcgtgtcggtcaaggacagcgacaagccgcgcatcgtgcccgcagtg
aggaagctcgccgaccggggttggcaggtgatcgcaaccggcggcaccgccgactatctg
gccgggcagggaatcgcggtcgagcgcgtgaacaaggtcgccgaagggcgcccgcacatc
gtcgaccggatcaaggacggcgacgtccagctgatcttcaacaccaccgagggatggcag
agcttgcaggattcgcagtcgatccgcgcttcggcgctcgccgccgacatcgcctattat
acgaccgccgcagcgagcgaggcggcggccgaggcgatcggggcgctgcgcgcacggtcc
cttgaagtgaagccgcttcaggactattattga
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