Sphingopyxis indica: KNJ79_14465
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Entry
KNJ79_14465 CDS
T09492
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
sina
Sphingopyxis indica
Brite
KEGG Orthology (KO) [BR:
sina00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sina03032
]
KNJ79_14465
03036 Chromosome and associated proteins [BR:
sina03036
]
KNJ79_14465
03400 DNA repair and recombination proteins [BR:
sina03400
]
KNJ79_14465
DNA replication proteins [BR:
sina03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KNJ79_14465
Chromosome and associated proteins [BR:
sina03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
KNJ79_14465
DNA repair and recombination proteins [BR:
sina03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
KNJ79_14465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
Nup214_FG
Motif
Other DBs
NCBI-ProteinID:
WOF45463
LinkDB
All DBs
Position
3090484..3090762
Genome browser
AA seq
92 aa
AA seq
DB search
MIRSELVQKIASENSDLRVEEVERIVDAFFDSIVDQLAAGGRVELRGFGAFSTRARESRT
GRNPRTGAPVAVKAKNVPYFKPGKEMRERLND
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgatccggtcggaactggttcaaaaaatcgcgagtgaaaacagcgatctacgcgtcgaa
gaggtcgaacggatcgtcgacgcttttttcgattccatcgttgaccagctcgccgccggc
ggccgcgtcgaactgcgcggcttcggcgccttctcgacccgcgcgcgcgagtcgcgcacc
ggtcgcaatccgcgcaccggagcgccggttgcggtgaaggcgaaaaacgttccctatttc
aagcccggcaaggaaatgcgcgagcggctgaacgattga
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