Sphingopyxis indica: KNJ79_17130
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Entry
KNJ79_17130 CDS
T09492
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sina
Sphingopyxis indica
Pathway
sina03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sina00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KNJ79_17130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sina03400
]
KNJ79_17130
Enzymes [BR:
sina01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KNJ79_17130
DNA repair and recombination proteins [BR:
sina03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KNJ79_17130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
PriA_3primeBD
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
Zn_ribbon_6
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WOF42858
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All DBs
Position
3649371..3651539
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AA seq
722 aa
AA seq
DB search
MTRARVLLLTAALGPLDYRVPHGSEAPLGSVVVAPLGPRRMGGVVWEDASFGAPEPVGDN
RLRNLYEIVGVPPIRAPLRRLVEWTSDYYLAPPGAVLRMVLPGAAFADARRPIVEYRATG
ELPARMTPQRIVALERIGARQGMVRELAAMAEVSEAVIRGLVQAGALEAVEVSADAPCPE
PDPAFAPPDLSDEQAAAAGQLRDAVAAARFETLLLDGVTGSGKTEVYMEAIAAAVEAGKQ
TLVLLPEIALTEPMLTRFAARFGCEPVPWHSGLRSTERRRAWHAIASGEAKIVVGARSAL
FLPYADLGLIVVDEAHETSFKQEDGVHYHARDVAVMRGSFEGLPVILASATPALESLAQV
EAGRYRHIVLPARYGGATLPDLAAIDMRRDPPDRGRWLAPPLVDALAGRLGKGEQSLLFL
NRRGFAPLTLCRTCGHRIQCPNCTAWMVEHRLVHRLACHHCGHVMPPPRLCPECEDEDSL
VACGPGVERVADEVALRFPEARTAIVTSDTLWSPAKAAEFVEAVEGGLVDIIIGTQLVTK
GYHFPNLTLVGVVDADLGLDGGDLRASERTFQQIAQVAGRAGRGVKPGEVLIQTRVPDAP
VMAALVANDREGFYAAEAAARRYAGAPPYGRFAALVISSEDIEVARGVAQRLGEKAPAAD
GLAIYGPAPAPLAMLRGRHRFRLLLHAPRSFDLQGTIRDWIARIDWPAKARLAIDVDPYS
FV
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcgcccgcgtcctccttttgaccgccgccctcggcccgctcgactatcgcgtg
ccccatggcagcgaggcgccgctcggcagcgtcgtcgtcgcgccgctggggccgcggcgg
atgggcggggtggtgtgggaggacgcaagcttcggcgcgcccgaacccgtcggcgacaat
cgcctgcgcaacctttacgaaatcgtgggcgtcccgccgatcagggcgcccttgcgccgc
ctcgtcgaatggacgagcgactattatctcgcgccccccggcgcggtgctgcgcatggtg
ctgcccggcgccgccttcgccgacgcgcgccgcccgatcgtcgagtatcgcgcgaccggc
gaattgcccgcgcggatgacgccgcagcgcatagtggcgctggaaaggatcggcgcgcgg
cagggcatggtgcgcgaactcgccgccatggccgaggtcagcgaggcggtgatccgcggg
ctcgtgcaggcgggggcgctcgaagcggtcgaggtttcggccgacgcgccctgtcccgaa
cccgatccggccttcgctccgcccgacctctccgacgaacaggccgccgccgccggacag
ctgcgcgatgccgtcgcggcggcaaggttcgagacgctgctcctcgacggcgtcaccgga
tcgggcaagaccgaagtttacatggaggcgatcgcggcggccgtcgaggcaggcaagcag
acgctcgtgctgctccccgaaatcgcgctgaccgaaccgatgctgacgcgcttcgccgcg
cgtttcggctgcgagccggtgccgtggcacagcgggctgcgctccaccgagcgccgccgc
gcgtggcacgcgatcgcgagcggcgaagcgaagatcgtcgtcggcgcgcgctcggcgctg
ttcctgccctatgccgatctggggctgatcgtcgtcgacgaggcgcatgagacgagcttc
aagcaggaggatggcgtccattatcatgcgcgcgacgtcgcggtgatgcgcggatcgttc
gaggggctgccggtgatcctcgcgagcgcgaccccggcgctcgagagcctggcccaggtc
gaagcggggcgctatcgccatatcgtcctgcccgcgcgctacggcggcgcgaccctgccc
gaccttgccgcgatcgacatgcgccgcgacccgcccgaccgcggccgctggctcgcgccg
ccgctcgtcgatgcgctcgccggccggctcggcaaaggcgagcagagcctgctctttctg
aaccgccgcggcttcgcgccgctgacgctctgccgcacctgcggccaccgcatccagtgc
cccaattgcaccgcgtggatggtcgagcaccgcctcgtccaccgcctcgcctgccaccat
tgcggccacgtcatgccgccgccgcgcctctgccccgaatgcgaggacgaggacagcctc
gtcgcctgcggccccggggtcgagcgcgtcgccgacgaggtcgcgctgcgctttcccgaa
gcgaggacggccatcgtcacctcggacactttatggtcgcccgcgaaagccgccgaattc
gtcgaggcggtcgagggcgggctggtcgacatcatcatcggcacccagctcgtcaccaag
ggctatcatttccccaacctgacgctcgtcggcgtggtggatgccgacctcgggctcgac
ggcggcgatctgcgcgcgtccgagcgcacctttcagcagatcgcgcaggtcgcggggcgc
gcggggcgcggggtcaagcccggcgaggtgctgatccagacgcgcgttcccgacgcgccg
gtgatggcggcgctcgtcgcaaacgaccgcgaaggcttctacgccgccgaggctgctgcg
cgcagatatgccggcgcgccgccctatggccgcttcgccgcgctcgtcatctcgtcggag
gatatcgaggtcgcgcgcggcgtggcgcagcggctcggcgaaaaggcgcccgccgccgac
gggctcgccatctatggccccgcccccgcgccgctcgcgatgctgcgcggccgccaccgc
ttccgcctgctgctccacgcgccgcgcagcttcgacctccagggcacgatccgcgactgg
atcgcgcgcatcgactggcccgccaaggcgcggctggcgatcgacgtcgatccctacagc
ttcgtttag
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