Sphingopyxis indica: KNJ79_18030
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Entry
KNJ79_18030 CDS
T09492
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sina
Sphingopyxis indica
Pathway
sina03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sina00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KNJ79_18030 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sina03019
]
KNJ79_18030 (groL)
03110 Chaperones and folding catalysts [BR:
sina03110
]
KNJ79_18030 (groL)
03029 Mitochondrial biogenesis [BR:
sina03029
]
KNJ79_18030 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sina04147
]
KNJ79_18030 (groL)
Enzymes [BR:
sina01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
KNJ79_18030 (groL)
Messenger RNA biogenesis [BR:
sina03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
KNJ79_18030 (groL)
Chaperones and folding catalysts [BR:
sina03110
]
Heat shock proteins
HSP60 / Chaperonin
KNJ79_18030 (groL)
Mitochondrial biogenesis [BR:
sina03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
KNJ79_18030 (groL)
Exosome [BR:
sina04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
KNJ79_18030 (groL)
Exosomal proteins of other body fluids (saliva and urine)
KNJ79_18030 (groL)
Exosomal proteins of breast cancer cells
KNJ79_18030 (groL)
Exosomal proteins of colorectal cancer cells
KNJ79_18030 (groL)
Exosomal proteins of bladder cancer cells
KNJ79_18030 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Pho88
SHOCT-like_DUF2089-C
Motif
Other DBs
NCBI-ProteinID:
WOF45569
LinkDB
All DBs
Position
3841843..3842967
Genome browser
AA seq
374 aa
AA seq
DB search
MEKVGNEGVITVEEAKSLATELETVEGMQFDRGYLSPYFVTNAEKLKVELEDPYILIHEK
KLSNLQALIPLLEQVVQSGRPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRR
KAMLEDIAILTAGNVVSEELGTKLENVTLGMLGRAKKIIIDKDNTTVVDGAGARSDIDAR
VAQIRAQIETTTSDYDREKLQERVAKLAGGVAVIRVGGATEVEVKEKKDRVDDALHATRA
AVEEGILPGGGIALLRALKALDGLKAANDDQQSGIDIVRRALRSPARQIADNAGEDGAFI
VGKLLESSDYNWGFNAATGEYEDLVKSGVIDPAKVVRTALQDAASVASLLITTEALVAEL
PKEDKAAPMPAMDY
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggtcggcaatgagggcgtcatcacagtcgaggaggcgaagagcctcgcgacc
gagctcgaaacggtcgagggcatgcagttcgatcgcggctatctctcgccctatttcgtg
accaacgccgagaagctcaaggtcgagctcgaggacccctatattctcatccacgagaag
aagctgtccaacctgcaggccctcattccgctgctggagcaggtggttcagtcgggccgg
ccgcttctcattatcgccgaggacgtcgaaggcgaggcgctggccacgctcgtcgtcaac
aagctccgcggtgggctcaaggtcgcggccgtcaaggcgcctggcttcggcgatcgccgc
aaagcgatgctcgaggatatcgcaatcctcaccgccggcaatgtggtcagcgaggaactc
ggcacgaagctggaaaacgtaacgctggggatgctcggccgcgccaagaagatcatcatc
gacaaggacaacaccaccgtcgtcgatggcgcaggcgcacgctcggacatcgatgcccgg
gtcgcgcagatccgtgctcagatcgagaccacgaccagcgactatgaccgcgaaaagctg
caggagcgcgtagccaagctagcaggcggcgtcgcggtcattcgcgtcggcggtgcgacc
gaagtcgaggtcaaggaaaagaaggatcgtgtcgatgacgcgctccacgccactcgcgcc
gcggtcgaggaaggcatcctgccgggcggcggcatcgctctgctccgcgcgctgaaggca
ctcgacggtctcaaggcggccaacgacgaccagcagtccggcatcgacatcgtcaggcgg
gctctgcgctcgccggcgcggcagatcgccgacaatgcgggcgaggacggcgccttcatc
gtgggcaagcttctggaaagcagcgactacaactggggcttcaacgccgccaccggcgaa
tatgaagacctggtgaagtcgggcgtcatcgatccggccaaggtcgtgcgtaccgccctc
caggacgccgcctcggtcgcctcgctgctcatcactaccgaggcgctcgtggccgagctt
ccaaaggaagataaggccgcgccgatgccggcgatggattactga
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