Sphingopyxis indica: KNJ79_19135
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Entry
KNJ79_19135 CDS
T09492
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sina
Sphingopyxis indica
Pathway
sina03030
DNA replication
sina03430
Mismatch repair
sina03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sina00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KNJ79_19135 (holA)
03430 Mismatch repair
KNJ79_19135 (holA)
03440 Homologous recombination
KNJ79_19135 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sina03032
]
KNJ79_19135 (holA)
03400 DNA repair and recombination proteins [BR:
sina03400
]
KNJ79_19135 (holA)
Enzymes [BR:
sina01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KNJ79_19135 (holA)
DNA replication proteins [BR:
sina03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KNJ79_19135 (holA)
DNA repair and recombination proteins [BR:
sina03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KNJ79_19135 (holA)
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-ProteinID:
WOF43208
LinkDB
All DBs
Position
4050097..4051128
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AA seq
343 aa
AA seq
DB search
MKAVKPAELERLRQLDPAVRLILLTGPDEATMNALAARLVALAGEEAERLDLSSSQLSQD
GALLAAEAASLSLFAGARVIRLEISGSGDDCLAAVDALLGADSAVNPVIATGASVTARSK
LVKLVEGSDAGLAAICYQPDRRALVGIAIAAAEEQGLRLANAEAQLLVDLVSGDQALMRR
ELEKMALYLDAARDRQRQVTAADIAALGAASHEEDVSECINVALGGKLGDLPDMLTRAAA
VGVAEIRIIRALAIRAGQLARLRAEVDGGAHPATVVSARSSGVFWKEQSAVTAQLHIWDS
VRIARLMTRLLDCERALKASGTPGNVLFRKLMTDIAHQAARAR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcggtcaagcccgccgaactcgaacgcctgcgacagctcgaccccgcggttcgc
ctcatcctccttaccggtcccgacgaggcaacgatgaacgcgctcgcggcaaggctggtc
gcgctcgcgggcgaggaggccgagcggctcgacctttcctcgtcgcagctttcgcaggat
ggcgccctgctcgccgccgaagcggcgtcgctgtcgctctttgcgggtgcgcgggtgata
aggctcgagatttcgggcagcggcgacgattgcctcgccgcggtcgatgcgctgctcggc
gccgacagcgcggtcaatccagtgatcgcgacgggggcatcggtcaccgcgcgctcgaag
ctcgtcaagctcgtcgagggatcggacgccggcctcgccgcgatctgctaccagcccgac
cgccgcgcgctcgtcggcatcgcgatcgcggcggccgaggaacagggactgcggcttgcc
aatgccgaagcgcaattgctcgtcgatctggtgtcgggcgaccaggcactgatgcgccgc
gagctcgagaagatggcgctctatctcgacgcggccagggatcgccagcggcaggtcacc
gccgccgacatcgccgcgctcggcgccgcgagccacgaagaggacgtcagcgagtgcatc
aacgtcgcgctcggcggcaagctcggcgacctgcccgacatgctgacaagggcggcggcg
gtcggggtggccgaaatccgcatcatccgcgcgctcgcgatccgcgcgggccagctcgcc
cggctgcgcgccgaggtcgatggcggcgcgcatcccgcaacggtggtgtcggcgcgcagc
agcggcgttttctggaaagagcagagcgcagtgaccgcgcagctccatatctgggattcg
gtgcgcatcgcgcggctgatgacgcggctgctcgattgcgagcgcgcgctcaaagcgtcg
ggcacgccgggcaatgtgctgttccgcaagctgatgaccgacatcgcgcaccaggcggcg
cgggcgcggtag
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