Sphingopyxis indica: KNJ79_21400
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Entry
KNJ79_21400 CDS
T09492
Name
(GenBank) strawberry notch family protein
KO
K26273
protein strawberry notch
Organism
sina
Sphingopyxis indica
Brite
KEGG Orthology (KO) [BR:
sina00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sina03036
]
KNJ79_21400
Chromosome and associated proteins [BR:
sina03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
KNJ79_21400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
MTS
Motif
Other DBs
NCBI-ProteinID:
WOF45573
LinkDB
All DBs
Position
pMC4:complement(203762..208090)
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AA seq
1442 aa
AA seq
DB search
MNNASAQAAAQAASLPLAPETPPARAVLAAAEQLLPHLEQGRPVDAATLRAAMETAFGAS
DASGAWDWKTAYDACEAATVLFLRKYGKALFRKSASPALRLSALAKITGLLPTHTRRSEQ
AQAFQQFSTPLPLGLAALTAAALTPADRVLEPSAGTGLLAILAEIAGATLDLNELAETRA
DLLSALFPAVPLTRYDAAQIDDHLDPATVPSVVIMNPPFSVMANVSGRMGDADYRHIASA
LARLAPGGRLVAITGANFSPDAPAWRDSFIRLQERGRIVFTAAIAGSVYAKHGTTIETRL
TVIDKRPAEDKARFPESAGVAPDVTTLLQWLDNLLPPRMSCSLPSVPVVAGAMPRTVRGY
LARAASVQPPRGIAAPDGLPLSYEPVDWTPPEGARLSDSIYEPYALQSIRLPGAQPHPTK
LVQSAAMASVAPPKPSYRPTLPAALVSAGILSDAQLETVIYAGEAHGEYLAGAWTVDETC
DVVSAASDDAAHSVRFRRGFMLGDGTGAGKGRQSAGIILDNWLQGRRKAVWISKSDKLLE
DAQRDWSALGMERLLVTPLSRFPQGTSIRLAEGILFTTYATLRSDDRGEKLSRVKQIVEW
LGSDFDGVIIFDESHAMQNAGGGKSERGDVAPSQQGRAGLRLQHALPNARVVYVSATGAT
TVHNLAYAQRLGLWGGEDFPFANRAEFIEAVENGGVAAMEVLARDLRALGLYTARSLSYD
GVEYELVEHQLTAEQTRIYDAYAGAFTIIHNHLDAAMQAANITGASGTLNRQAKAAARSA
FESAKQRFFGHLLTSMKTPTLIRSIEQDLATGHAAVVQIVSTGEALMERRLAEVPTEEWN
DIRVDITPREYVLDYLAHSFPVQLYEPFTDSEGNLSSRPVYRDGQPVESREAVARRDELI
ERLAALAPVPGALDQIVQRFGTEVAAEVTGRSRRVVRKGERLVVENRAASANLAEAAAFM
DDQKRVLIFSDAGGTGRSYHADLAARNQRLRVHYLLEPGWKADAAIQGLGRTNRTNQAQP
PLFRPVATDVKAEKRFLSTIARRLDTLGAITRGQRQTGGQGLFRPEDNLESHYARDALRQ
LYLLLVRGKVDGCSLDRFESATGLRLTDDNGIKDELPPITTFLNRLLALTIELQGVLFTA
FEQLLNAKIEGAIRAGIYDVGLETLRAESFVVTDSDVIHTHPGTGAETRLLTIACRERNH
PTTLADALDHLGDPRARLLVNGRSHRAAVQVPASAIMLDDGEIERRVCLIRPMERHYAPL
HMMAESHWQEVGRDAFAKAWHAEIADVPEFSESTIHIVAGLLLPIWKRLPDESTRVYRLQ
TDAGERIIGRRVSPAWAANAATTGATTLAPDHAFSALMDGTTTLDLAEGLQLRRARVMGS
YRMELNGFTEAMRERLRAYGLFSEIISWKLRFFVPVDTTGPVVLAKLLDTYPVARIIERE
AA
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacgcttccgcacaggcggccgctcaggccgcctcgctcccgctcgcaccggag
accccgccggctcgcgccgtccttgccgccgccgagcagcttctgccccatctcgaacag
ggtcggccggtcgacgccgcgacgctgcgcgccgccatggagaccgccttcggcgcgtcc
gacgcgagcggcgcctgggactggaagactgcttacgacgcctgcgaagccgccaccgtc
ctgttcctgcgcaaatacggaaaggcgctcttccgcaaatccgcttcgccggctttgcgg
ctttccgctctggccaaaatcaccggccttttgccgactcatacgcgccggtccgagcag
gcgcaggcctttcagcagttttctacgcccctgccgctgggcctcgcggcgctgaccgcg
gccgcgctgacgccggccgaccgcgtgctggagccctcggccggcaccggccttctggcg
atcctcgccgagattgcgggcgcgacgctcgatctcaacgaactggccgagacacgcgcc
gacctgctttccgctctctttccggccgtaccgctcacgcgctacgacgcggcccagatc
gacgaccatctggatccggccactgtcccaagcgtcgtcatcatgaatccgcccttctcg
gtgatggccaatgtttccgggcggatgggcgacgccgactatcggcacatcgcctccgcc
ctcgcacgacttgctccgggcggtcgtctcgtcgcgatcaccggcgccaatttctcgccc
gacgctccggcctggcgagacagtttcatccggttgcaggagcgcggccgcatcgtgttc
accgccgcgatcgcgggctctgtctatgccaagcatggcacgaccatcgagacgcgtctg
accgtcatcgacaagcgtcccgccgaagacaaagcgcgctttcccgaatccgccggagtc
gcgcccgatgtcacgacgctcctgcaatggctggataacctgcttccccctcgcatgagc
tgctcgctgccaagcgtgcccgtcgtggctggcgctatgccccgcaccgtgcgcggctat
ctcgcccgcgcggccagcgtgcagccgcctcgcggcattgccgcgcccgacggcctgccg
ctcagctacgagccggtcgactggacgccgcccgagggcgcacgcctgtctgactcgatc
tacgaaccctatgcgctccagtcgatccgccttcccggcgcgcagccccatccgaccaag
ctcgtgcaatccgcagccatggcatcggtcgcgccgcccaagccgagctaccgaccgacg
cttccggccgcgctcgtctccgcgggcattctctccgatgcgcaactcgaaacggtcatc
tatgccggcgaagcgcatggtgaatatctcgccggcgcctggaccgtggatgagacctgc
gatgtggtttccgcagcttccgatgatgcggcccacagcgtccgcttccgccgcggcttc
atgctcggcgacggcaccggtgccggcaagggccgccagtcggccgggatcatcctcgac
aactggctccagggccgccgcaaggccgtctggatctcgaagtccgacaagctgctcgag
gacgcccagcgcgactggtcggcgctcggcatggagcgcttgctggtcacgccgctgtcg
cgctttccgcagggcacgtccatccggcttgccgaaggcatcctttttaccacctatgcc
acgctacggtccgacgaccggggagaaaagctttcccgcgtcaagcagatcgtcgaatgg
ttgggctccgacttcgatggagtgatcattttcgacgagagccacgccatgcaaaacgcc
ggcggcggaaaaagtgaacgcggcgacgtcgccccctcgcagcagggccgtgccgggctc
aggctccagcacgcgctccccaatgcgcgtgtcgtctacgtctcggcaaccggggcaacc
accgttcacaatctcgcttacgcccagcggctcggcctgtggggcggggaggatttcccc
ttcgccaaccgcgccgagttcatcgaggccgtcgagaatggcggcgtcgcggcgatggaa
gtgctcgcccgcgacctgcgcgcactcggcctctacacggcccggtcgctctcctatgac
ggtgtcgaatatgagctggtcgaacaccagcttactgctgagcagacccgcatctacgac
gcctatgccggcgcctttaccatcatccacaatcatctcgacgcggccatgcaggccgcc
aatatcaccggcgcgtcaggcaccctcaaccggcaggcgaaagccgccgcccgctcggcc
ttcgaaagcgccaaacagcgtttcttcggccatctgctgacgagcatgaagaccccgacg
ctgatccgctcgatcgagcaggatctcgccaccggccatgccgccgtcgtccagatcgtt
tcgaccggcgaggccctgatggagcgtcgtctggccgaagtcccgaccgaagaatggaat
gatattcgcgtggatatcacgccccgcgagtatgtcctggattaccttgcccattccttc
ccggtgcagctctacgagccgttcaccgacagcgaaggcaatctttcgtctcgccccgtc
tatcgcgatggacaacccgtcgagagccgcgaagccgtcgcccgccgcgacgagctgatc
gagcggctcgcagcgcttgcgcccgttcccggcgcgctcgatcagatcgtccagcggttc
ggcacggaggtggccgccgaagtcaccggccgatcacgccgcgtcgtccgcaagggcgag
cgcctcgtcgtcgagaaccgcgcggcatccgccaatctcgccgaggcggccgccttcatg
gatgaccagaagcgcgtgctgatcttttcggacgctggcggcaccggacgcagttatcat
gccgatcttgcggcccggaaccagcgcctgcgcgttcattatctgcttgagccgggctgg
aaagccgatgccgccatccagggtctcggccgcaccaaccgcacaaaccaggcgcagccg
ccgctgtttcggccagtcgccaccgacgtcaaggccgagaagcgctttctctccacaatc
gcccgccggctcgacacgctcggcgccatcacgcgcgggcagcgccagaccgggggtcag
ggccttttccggcccgaagacaatctcgaatcgcattacgcgcgcgatgcgctccggcag
ctctatctgctgctcgttcgcggcaaggtcgatggctgctcgctcgaccgctttgaatcg
gcgaccggcctccgcttgaccgacgacaatggcatcaaggacgaactgccgccgatcacg
acgttcctcaatcgcctgctggcgctgaccatcgagctgcagggcgtgttgttcactgcc
ttcgaacaattgctcaacgccaagatcgaaggcgccatccgcgccggcatatacgatgtc
gggctcgaaaccctgcgtgcggaaagcttcgtcgtcaccgacagcgacgtcatccatacg
catccggggaccggggcggaaacgcgcctgctcaccatcgcatgccgcgagcgcaatcac
cccacgaccctggctgacgccctcgatcatcttggcgatccgcgcgcgcggctgctggtc
aatggtcgctcacatcgcgccgccgttcaggtgccggcatccgcgatcatgctcgacgat
ggcgaaatcgagcggcgcgtctgcctcatccggccgatggaacggcactatgcacccttg
cacatgatggccgaaagccattggcaggaagtcggccgcgacgctttcgccaaggcctgg
catgccgaaattgccgacgtccccgaattctccgaaagcacgatccacatcgtcgccggc
ctgctgttgccgatctggaaacgcctgcccgacgaatccacccgcgtctatcggctccag
accgacgctggcgagcgcatcatcgggcgacgggtctccccggcatgggcggcaaacgcc
gccaccacgggggccacgaccctcgcacctgaccacgctttttccgcgttgatggacggg
acgaccactctcgatcttgccgaggggctccaactgcgtcgcgcgcgcgtgatgggcagc
tatcgcatggaactgaacggctttaccgaagcgatgcgggagcgtctgcgcgcctatggc
ctgttcagcgagatcatctcgtggaagctgcgcttcttcgtcccggtcgacaccaccggt
cccgtcgttctcgccaagctgctcgatacctatccggtcgcgcgcatcatcgagcgggag
gcagcctga
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