Sphingopyxis indica: KNJ79_21650
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Entry
KNJ79_21650 CDS
T09492
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
sina
Sphingopyxis indica
Pathway
sina03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sina00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
KNJ79_21650 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sina03400
]
KNJ79_21650 (mutS)
DNA repair and recombination proteins [BR:
sina03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
KNJ79_21650 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_29
Motif
Other DBs
NCBI-ProteinID:
WOF45960
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Position
pMC4:complement(267385..269988)
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AA seq
867 aa
AA seq
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MMAQYWALKEKAGDCLLFYRMGDFFELFFDDAKAAASTLDIALTSRGEHGGAPVPMCGVP
VHSAESYLARLIKAGHRVAIAEQVETPAEAKARGGSKALVARDIVRFVTAGTLTEEALLE
GRSANRLAAIAEVGSEGSVAIAAADISTGRFEVVAVAPTQVEAELARLAPSELLVSDAAA
DLPAWGARQLVRRPAADFASEAGRKRLEALFGVQTLDGFGQFGRGECAAMGALAAYLDHV
ATGQPIFLQPPVRLSASDRMAIDAATRESLELVRTMAGTREGSLLGTIDRTVTAAGARLL
ADDLASPLTDRAAILDRLDLVDALARDALWRDELRADLRALPDAGRALGRLVAGRGGPRD
LAQLRDALGGARLLRERLARRGDLPPLLARLLPGLDGHGALVDELTRALIETPPVDAAQG
GYVAEGYDAALDALRETARDGRKAIAALEAQYRERTGIASLKIRHNGVLGYHVEVPARHA
DALMAPTSGFTHRQTLAGVVRFNSADLHEAASRVTQAGVHALAAEAAHLEALTEQATQRR
EAIAASCDVLARIDVAAALADHAMSHGWCRPDLADEPCLDVTGGRHPVVEAALAKSGERF
VPNDVSLSQADRLWLVTGPNMGGKSTFLRQNALIVVLAQAGAFVPASAAKLGLVDRLFSR
VGASDNLARGRSTFMVEMVETAAILAQATPDSFVILDEVGRGTSTYDGLALAWSVVEAVH
EVNRCRCLFATHYHELTRLAETLDALSLHHVRAREWQGDLVLLHEVAEGPADRSYGLAVA
RLAGVPAGVVKRAEAVLAKLEAGRQATGGLAAGLDDLPLFAATLAEAPAEKADALREALA
DIDPDALAPREALEALYRLKQLLAEGG
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgcaatattgggcgctcaaggaaaaggcgggcgattgcctgctcttctatcgc
atgggcgatttcttcgagctgttcttcgacgatgccaaggcggcggcttcgacgctcgac
atcgcgctgacctcgcgcggcgagcatggcggggcgccggtgccgatgtgcggcgtgccc
gtccattcggccgaatcctatctcgcgcggctgatcaaggcggggcaccgcgttgcgatc
gccgagcaggtcgaaaccccggcggaggcaaaggcgcgcggcgggtcgaaggcgctcgtc
gcgcgcgacatcgtgcgcttcgtcaccgcggggacgctcaccgaagaggcgctgctcgaa
gggcgcagcgcgaaccgcctcgccgcgatcgccgaagtcggaagcgagggcagcgtcgcg
atcgccgccgccgacatttcgaccggccggttcgaggtcgtcgcggtcgccccgacgcag
gtcgaggccgagctggcgcggctcgcgccgtccgagctgctggtgagcgacgcggcggcc
gatctccccgcatggggcgcgcgccagctcgtgcggcgcccggcggcggattttgccagc
gaagccgggcgaaagcggctcgaggcgctgttcggggtgcagacgctcgacggtttcggc
cagttcgggcgcggcgaatgcgcggcgatgggggcgcttgccgcctatctcgaccatgtc
gcgaccggccagccgatcttcctccagccgccggtgcgcctgtcggcatcggaccgcatg
gcgatcgacgcggcgacgcgcgaaagcctcgaactcgtccgcacgatggcggggacgcgc
gagggcagcctgctaggcaccatcgaccgcaccgtcaccgcggccggcgcgcggctgctc
gccgacgatctggcgagtccgctcaccgaccgcgccgcgatcctcgaccgcctcgatctc
gtcgatgcgctcgcgcgcgatgcgctgtggcgcgacgaattgcgcgccgacctgcgcgcg
ctgcccgacgccggacgcgcgctcgggcggctcgtcgcggggcgcggcggcccgcgcgac
cttgcgcagctgcgcgacgcgctcggcggggcgcggctgctgcgcgaacggctcgcgcgg
cgcggcgacctgccgcccttgctcgcgcggctgctgccggggctcgacgggcacggcgcg
ctcgtcgacgagctgacgcgcgcgctgatcgaaaccccgccggtcgatgccgcgcagggc
ggctatgtcgccgagggctatgacgccgcactcgacgcgctgcgcgaaaccgcgcgcgac
gggcgcaaggcgatcgccgcgctcgaagcgcaatatcgcgagcgcaccggcatcgcctcc
ttgaagatccgccacaatggcgtgctcggctatcatgtcgaggtgcccgctcgccatgcc
gacgcgctgatggcgcccacgtcgggcttcacccaccgtcagacgctcgcgggcgtcgtg
cgcttcaactcggccgatctgcacgaggcggcgagccgggtcacgcaggcgggcgtccac
gcgctcgctgccgaggcggcgcatctcgaagcgctcaccgagcaggcgacgcagcggcgc
gaggcgatcgccgcgagctgcgacgtgctcgcgcggatcgacgtcgccgcggcgctcgcc
gaccatgcgatgagccatggttggtgccgccccgatctcgccgacgaaccgtgcctcgac
gtgacgggcggccgccatccggtggtcgaggcggcgctggcgaaatcgggcgagcgcttc
gtgccgaacgatgtctcgctgtcgcaggccgaccggctgtggctcgtcaccggccccaat
atgggcggcaaatcgaccttcctcaggcagaatgcgctgatcgtcgtgcttgcgcaggcg
ggcgctttcgtgcctgcgagcgcggcgaagctcgggctcgtcgaccggctgttcagccgc
gtgggggcgagcgacaatctcgcgcgcgggcgctcgaccttcatggtcgaaatggtcgaa
accgcggcgatcctcgcgcaggcgacgcccgacagtttcgtgatcctcgacgaggtcggg
cgcggcacctcgacctacgacgggctcgcgctcgcctggtcggtggtcgaggcggtgcat
gaggtcaaccgctgccgctgcctgttcgcgacgcattatcacgagctgacccgcctcgcc
gagacattggatgcgctgtcgctccaccatgtccgcgcgcgcgaatggcagggcgatctg
gtgttgctgcacgaggttgccgaaggcccggccgaccgcagctacggcctcgcggtcgcg
cggctcgcgggcgtgcccgccggtgtcgtcaagcgcgccgaggcggtgctcgcgaagctc
gaggcggggcgtcaggcgaccggcgggctcgcggcggggctcgacgacctgccgctcttc
gccgcgacgctcgccgaggcgcccgcggaaaaggccgatgcgctgcgcgaggcgctcgcg
gacatcgaccccgacgcgctcgccccgcgcgaggcgctcgaggcgctctatcggctcaag
cagctattggcggaggggggatag
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