Sphingopyxis indica: KNJ79_21960
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Entry
KNJ79_21960 CDS
T09492
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
sina
Sphingopyxis indica
Brite
KEGG Orthology (KO) [BR:
sina00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sina03016
]
KNJ79_21960 (mnmE)
Transfer RNA biogenesis [BR:
sina03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
KNJ79_21960 (mnmE)
Prokaryotic type
Methyltransferases
KNJ79_21960 (mnmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
AAA_28
FeoB_N
Dynamin_N
AAA_18
AAA_25
AAA_29
RsgA_GTPase
Guanylate_kin
nSTAND3
ABC_tran
Arf
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WOF45964
LinkDB
All DBs
Position
pMC4:315345..316640
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AA seq
431 aa
AA seq
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MSSGMPPAAIAVVRISGEGAGAALAALAGCVPEARRASLRELKDAGGAPLDRALILWFPG
PATATGEDLAELHLHGGRAVVAAVEAALAAMPGLRRAEAGEFTRRAFLNGRIDLAEAEGL
ADLLAAETESQRVQALGMASGHVSCAVAAWQERLLGLMAQVEAELNFSDEEDVELSDDCA
YRVASAMQALAGELGEWLERPAAEVIAEGLSVVIAGPPNAGKSTLINALAKRELAIVSPV
AGTTRDVIETPLALDGIAMRFSDTAGMRGDSADAIEAIGIDRAKAAVAAADILLWLGPPD
AAPAHPRCLRIAAQADRWRGDAQAEAEAARCDLILSAASGEGMDALHRAIVAAARTLLPR
EGEAALRRRQRDALAEAKAWLDVEPGSHEAADLILLAERLRLAASALDRITGRAGVEEML
DALFGRFCIGK
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
ctgtcgagcgggatgccgccggcggcgatcgcggtcgtacgcatcagcggggaaggggcg
ggggcggcgctcgccgcgcttgccggatgcgtgcccgaagcgcgccgcgcgtcgctccgc
gagctgaaggatgccggcggtgcgccgctcgatcgcgcgctgatcctgtggtttcccggc
cccgcgaccgcgaccggcgaggatctggccgagctgcatctgcacggcggtcgcgcggtg
gtcgcggcggtcgaggcggcgctcgcggcgatgccggggctgcgccgcgccgaggcgggg
gagttcacgcggcgcgcgtttctgaatgggcggatcgacttggccgaagccgaggggctt
gccgacctgctggcggcggagaccgagagccagcgggtgcaggcgctcgggatggcgagc
gggcatgtgtcgtgcgcggtcgcggcgtggcaggagcggctgctcggattgatggcgcag
gtcgaggccgagctcaacttctccgatgaggaggatgtcgaactttccgatgattgcgca
tatcgcgtagcaagtgcgatgcaggcgctggcgggggagctgggcgaatggctggagcgc
ccggcggcggaggtgatcgccgaggggctttcggtggtgatcgcgggtccacctaatgca
ggaaaatctacacttatcaatgcattagctaagagagagctggcgatcgtgtcgccggtt
gcggggacgacgcgcgacgtgatcgaaacgccgctcgcgctcgacggaatcgcgatgcgc
ttttcggacaccgccgggatgcgcggggacagtgccgatgcgatcgaggcgatcgggatc
gaccgcgcgaaggcggcggtcgcggcggccgacatcctgctgtggctcggcccgcccgac
gcggcacccgcgcatccgcgctgcctgcgcatcgccgcgcaggccgaccgctggcgcggc
gatgcgcaggccgaggcggaggcggcgcgctgcgacctgatcctgtcggcagcgagcggc
gaggggatggatgcgctgcatcgcgcgatcgtcgccgcggcgcgcacgctgctcccgcgc
gagggcgaggcggcgctgcgccggcgccagcgcgacgcactcgccgaagcgaaggcctgg
ctcgacgtcgagccgggctcgcacgaagcggccgacctgatcctgctcgccgagcggctg
cggctcgcggcgagcgcgctcgaccgcatcaccggccgcgccggggtcgaggagatgctc
gacgcgctgttcggccgcttttgcatcgggaaatga
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