Sphingobium indicum B90A: SIDU_00875
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Entry
SIDU_00875 CDS
T04604
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
sinb
Sphingobium indicum B90A
Pathway
sinb00470
D-Amino acid metabolism
sinb00550
Peptidoglycan biosynthesis
sinb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sinb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SIDU_00875
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SIDU_00875
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sinb01011
]
SIDU_00875
Enzymes [BR:
sinb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
SIDU_00875
Peptidoglycan biosynthesis and degradation proteins [BR:
sinb01011
]
Precursor biosynthesis
Amino acid ligase
SIDU_00875
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
APL93196
UniProt:
A0A1L5BK75
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Position
171224..172612
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AA seq
462 aa
AA seq
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MGIVSDVFAGRKYAVLGLARSGLATVECLAGSGAQVVAWDSREEAREAVADKAELADPTE
IDLKGFDGVVVSPGVPLNKHPIAMHAKLAGVPVIGDIELFALARPSLPKHRVVGITGTNG
KSTTTALVHHIIETAGIPTRMGGNIGLPILGQTPLPEGGVYVLELSSYQIDLTQSLDCDV
AVLLNITPDHLDRYNGFEGYVASKARLFAMQSAGHVAVIATEDEPSRGIFHSIRHSRGGG
NPSPDLASGRDDGEMDPPPRGNDGVVEVQSGDIDPSAQAGWPALQGPHNAQNAAVAIAVA
RALGIDEATIEQGLQSYASLPHRMQRVRELNGVLYVNDSKATNAASTAPALAAYPPVDGR
KRLHWIVGGLAKTDNLDECAPWFGHVAQAYTIGEAGPMFAELLRPHMAVDDSEMLSAGVR
RAARVAQPGDVVLLSPACASFDQFRDFEARGDAFAAAVAALE
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggggatcgtctccgacgtctttgcgggcaggaaatatgcggtgctgggcctggcgcgg
tccggcctcgccacggtggaatgcctggcggggagcggagcgcaggtcgtggcatgggac
agccgcgaggaagcgcgtgaggcggtcgcggacaaggcggaactggccgatcccaccgaa
atcgacctcaagggctttgacggcgtggtggtgtcgcccggcgtgccgctcaacaagcat
cccatcgccatgcatgcgaagctggcgggcgtgccggtcattggcgacatagaattgttc
gcgctcgcccggccaagcctgccgaagcatcgggtggtcgggatcaccggaaccaacggc
aagtcgaccacgaccgcgctggtccatcatatcatcgagacggcgggcatcccgacgcgc
atgggcggcaatatcgggcttccgatcctcggccagaccccgttgccggagggcggcgtc
tatgtgctggaactgtcgagctaccagatcgacctgacgcagagcctcgactgcgacgtg
gcggtgctgctcaacatcacgccggaccatctggatcgctataatggctttgagggctat
gtggcgtccaaggcgcggctgtttgcgatgcagtcggccggccatgtcgcggtaatcgcg
acggaagatgaaccgagccgggggatattccattccatccgtcattcccgcggaggcggg
aatccatctccggaccttgcatctggacgcgacgatggggagatggatcccccccctcgc
gggaatgacggggttgtggaggtgcaatcgggcgacatcgatccgtccgctcaggccggc
tggcccgcattgcaaggcccgcacaacgcccagaacgccgccgtcgccatcgccgtcgcc
cgcgcgctgggcatcgacgaagcgaccatcgaacagggcctgcaaagctatgcctctctc
ccgcaccggatgcagcgggtgcgggagttgaacggcgtcctctacgtcaacgacagcaag
gcgaccaacgccgcctcgaccgcgcccgccctcgccgcctatcccccggtcgacgggcgc
aagcggctgcactggatcgtcggcggccttgccaagacggacaatctggacgagtgcgcg
ccctggttcggccatgtcgcgcaggcctataccatcggcgaggctggccccatgttcgcg
gaactgctgcgcccgcatatggcggtggacgattctgagatgctgtccgccggcgtccgc
cgcgcggcgcgggtggcccagccgggggacgtggtgctgttgtcgcccgcctgcgcgagt
ttcgaccagttccgcgatttcgaggcgaggggcgatgccttcgccgctgccgtcgccgcg
ttggaatag
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