Sphingobium indicum B90A: SIDU_01980
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Entry
SIDU_01980 CDS
T04604
Name
(GenBank) DNA mismatch repair protein Vsr
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
sinb
Sphingobium indicum B90A
Brite
KEGG Orthology (KO) [BR:
sinb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sinb03400
]
SIDU_01980
DNA repair and recombination proteins [BR:
sinb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
SIDU_01980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
Yop-YscD_ppl_1st
Motif
Other DBs
NCBI-ProteinID:
APL96188
UniProt:
A0A1L5BTI3
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All DBs
Position
complement(400152..400550)
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AA seq
132 aa
AA seq
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MRLIRGRDTKPELRVRRALHAAGLRYRLQAKDLPGRPDIVFRKRKVAIFVHGCFWHQHPD
PACKLARMPKSRQEFWEPKLRGNRSRDEAVKAKLEAGGWRVFEIWECQLGAEPLDMIITE
IQAALRRPGKTG
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctcatccggggacgcgacaccaagcctgagttgcgggtgcgacgcgcgctacac
gcggctggcctgcgctaccgcctccaggccaaggacctgcccggcagaccggacatcgtg
ttccgcaagcgcaaggtcgcgatattcgtgcacgggtgcttttggcatcagcatccagat
ccggcgtgcaagctggcgcgcatgccgaagtcgaggcaggagttctgggaaccaaagttg
cggggaaataggtcgcgcgacgaggcggttaaggctaagcttgaggcggggggatggcga
gtgttcgagatttgggaatgccaactcggcgctgagcctctcgacatgatcatcacggaa
atccaggccgcgctgcggcggccaggaaaaactgggtag
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