Sphingobium indicum B90A: SIDU_02010
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Entry
SIDU_02010 CDS
T04604
Name
(GenBank) helicase
Organism
sinb
Sphingobium indicum B90A
Brite
Spliceosome [BR:
sinb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
SIDU_02010
Complex C
U4/U6.U5 tri-SnRNP related factors
SIDU_02010
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Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
APL93393
UniProt:
A0A1L5BKL2
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All DBs
Position
404924..408244
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AA seq
1106 aa
AA seq
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MFDPVTIDLIRGAPPLGDLDFSELPQRFTNAFAEIVAARVRLRGATTVEQRGEAFIELLS
EMRRLAAAQELLVATAPERADRASAAFVAGTAHQLCLMAETVVAEGEPCFSSINAIHADH
DICATLLFLIADSQSDAAEMAKRLKRPDGDLSAEGRLVAAIADLANGRLREVITSEVDED
NFEFYDPPSDTTASGIAVEALLRRLHAGVIQLARELLVPPHEGVAADAIPESRRIFAQVR
DLSVTPIEGVFEEDGPEVFSSFPGPLHIAKLLLAVSGDLAEAALCRVPAPNGIDPSAWWQ
VIRRAARKRPYLWRNHREALEKGYLAKGVSAAVSFPTGGGKSTLAELKIAAALLGGGQVV
VLAPTLALVDQTAFTLGNAFKDYTVLGDLDDEITFSDVLELPEIIVTTPERCLVLQSIQP
EAFAQVALVVFDECHLIHPRESDRSRRAIDAMLCILNLTSYAPGADLLLVSAMMQNAEEM
AGWVAELTGRPCLPLDLAWKPTRQARGCVAYEAARITELNELLATEQLTATTKGVPKPLA
SRLDAAPFAFFCLRQTWATRKRDDYALMALLDEAVPFATGVSEKSGDWYMTPNGNIVAGT
IAAAAAEDGLKTLTFVQSTIAAESTVRHFRSLLPKRRVVLTEEEQGWRKLVEEEMGGPQH
CYLKLDASGQVDGSATSHHGQLLKPERMLHESLFKRRDGVDALFATSTLAQGMNLPSDVV
LIAGDSRWDVSDDKFKQLDAHELLNAAGRAGRAGEGGQGFVLVVPSKIINIDDVDNTIHR
HWMSLQSIFSQSDQCLQIDDPITGLLDRIHMHAHEGNEDYFLARLPVGESDAPDEPAKAM
IRRSFAAYRKRQEGKAEWIESRIVAALARRDELAPKQDLNWLERVAASAGLPYEVVASLA
ALIEAGAFDGDSTDCMNRLFEWIEANPTWLMHLIRPNDIEGLFGKDYRAIAGNAAKAKVA
LPQIRPLLTAWMAGKPLCELERAIGTKEHLIKTCETARHFAVRLVPDLAFVAGLPARILA
ARAVAAGKEPVMPIVLQTLSGVVRKGCASAEQLANAVHLNSDSRPAARAQFLQIERHIPA
GEPFETFDTVLERVRHAHLLAMFDEL
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatcctgtcacgatcgaccttatcagaggcgcaccgccacttggcgacctcgac
ttttccgagctgccccaacgcttcaccaatgccttcgccgaaatcgtcgcagcgcgagtc
cggctgcgaggtgccacaacggtcgagcagcgcggcgaagcctttattgagctgctttcg
gagatgcgccgtctggcggcggcgcaggagctgctcgtcgcaactgcgccggagcgtgcc
gaccgcgcctcggccgcattcgtggccggcaccgcacaccagctgtgcctcatggccgag
accgtcgtagccgaaggcgagccgtgtttttccagcattaacgctatccatgccgatcat
gacatctgcgcgacgctgctgttcttgatcgcggactcgcagagcgacgctgccgagatg
gccaagcggctcaagcgtccggacggcgacctgagcgccgaaggtcgactggtcgccgcg
atcgccgacttggctaatggccgtctgcgcgaagtgatcaccagcgaggtcgacgaagac
aatttcgaattctacgatcctccatctgatacaaccgccagcggtatcgcagtggaagcg
cttcttcgccggctgcacgcgggcgtcatccagctcgcgcgtgagctgctcgttccacca
cacgagggcgtcgcggcggatgcgatcccggaatcgcgccgcattttcgcccaggtgcgc
gacctttccgtcaccccgattgaaggtgtgttcgaagaggatggtcccgaggtcttcagt
tcctttcccggtccgctccacatcgccaagctgctgctggcggtgtcgggcgatctggcc
gaagcagcactttgccgggttcctgcgccgaatggcatcgacccaagcgcgtggtggcag
gtcattcgccgggccgcgcgcaagcgcccctatctctggcgaaatcaccgcgaggcgctg
gagaagggctatctcgcgaaaggcgtttcggcggcggtcagcttcccaaccgggggaggc
aagtcgacgctggcagaacttaagatcgctgcggcgctgcttggcggcggacaggtcgtt
gtgctcgcgccgacactggcgttggtcgaccagaccgccttcacgcttggcaatgcgttt
aaggactataccgttctcggcgatctcgacgacgagatcaccttctccgacgtcctcgag
cttccggagataatcgtcaccacgcccgagcgctgtctcgtgctgcagtcgatacagccg
gaagcattcgcgcaggtcgcgctcgttgtgttcgacgagtgccacctcattcatcctcgc
gaatccgaccgcagccggcgggcgatcgacgcaatgctgtgtatcctaaatctcactagc
tatgcgcccggtgccgacctgttgctcgtatctgcgatgatgcagaacgccgaagagatg
gccggctgggtggccgagctcaccggccgcccttgcctcccgctcgacctcgcttggaag
ccgacccgccaggcccgcggctgcgtggcctatgaagccgcgcgcatcaccgagctcaac
gaactgctcgccacggaacagctcaccgcgaccactaagggcgtgcccaagcctctcgca
agccgcctcgatgcggcgccctttgcctttttctgcctgcggcagacctgggcgacccgc
aagcgcgacgactatgcgctgatggcgctgcttgacgaggcggtgccgttcgcgaccggc
gtgtcagaaaaatccggcgactggtatatgacgccgaacggcaacatcgtcgcgggtacg
atcgccgcggcagcagccgaggacggcctcaagaccctgaccttcgtccagagtacgatc
gccgccgaatccaccgtccggcattttcgtagcctgctgcccaagcgtcgcgtcgtgctc
accgaggaggagcaaggttggcgcaagctggtcgaggaagagatgggcgggccgcagcac
tgctatctcaagctagacgcttccggccaggttgatgggagcgccaccagccatcacggc
cagctgcttaagcccgagcgcatgctgcacgagtcgttattcaagcggcgtgacggtgtc
gacgccctgttcgcaacttcgaccctggcgcagggcatgaacctgccgagtgacgtggtc
ctgatcgccggcgacagccgctgggacgtgtcggacgacaagttcaagcagctggacgcg
cacgaactgctcaatgccgccggccgggccgggcgtgcgggcgaaggcggccagggcttt
gtgctggtggtgccgagcaagatcataaacatcgatgatgttgacaatacgatccatcgc
cactggatgtcgctccagagcatcttctcgcagtcggaccagtgcttgcagatcgatgac
ccgataaccggcctgctggatcgcatccacatgcatgcgcacgaaggcaatgaggactat
ttccttgcccgactgccagtcggcgagtcggatgcgcccgacgaacccgccaaggccatg
atccgtcgatccttcgccgcgtaccgcaagcgccaggaaggcaaggccgagtggattgaa
agccgcatcgtcgcagcgcttgcgcgccgtgacgagctggcgccgaagcaggacctgaac
tggctcgagcgagtggctgcctccgcggggctaccctatgaggtcgtcgccagcctggcc
gcgctgatcgaggcgggggcgtttgacggtgacagcacggactgcatgaataggttgttt
gagtggatcgaggccaacccgacctggttgatgcacctgatcaggcccaacgacatcgaa
gggctgtttgggaaggactatcgtgcgatcgccggcaatgccgccaaggcgaaggtcgcc
ttgccgcagatcaggccgctgctgaccgcatggatggcgggaaagccgctctgcgaactc
gaacgggcgatcggaaccaaggagcatcttatcaagacctgcgagaccgcgcggcacttc
gcggttcgccttgttccggacttggccttcgtcgccggcctgccggcacgcatactcgcg
gcaagagccgtggcggctggaaaagagcctgtcatgccgattgtcttgcagactttgagc
ggcgtggtccgcaagggctgcgcaagcgctgagcaactcgcgaacgcggtgcatctgaac
tcggattcacggcccgctgctcgtgcgcagttcctgcagatcgagcgccatattccagcg
ggcgaacccttcgagacttttgacaccgtccttgagcgggtccggcatgctcatctgctc
gcaatgttcgacgaactctag
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