Sphingobium indicum B90A: SIDU_02080
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Entry
SIDU_02080 CDS
T04604
Name
(GenBank) LysR family transcriptional regulator
KO
K05596
LysR family transcriptional regulator, chromosome initiation inhibitor
Organism
sinb
Sphingobium indicum B90A
Brite
KEGG Orthology (KO) [BR:
sinb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sinb03000
]
SIDU_02080
03036 Chromosome and associated proteins [BR:
sinb03036
]
SIDU_02080
Transcription factors [BR:
sinb03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SIDU_02080
Chromosome and associated proteins [BR:
sinb03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
SIDU_02080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_AsnC-type
HTH_24
HTH_30
P22_Cro
Sigma70_r4
HTH_11
MarR_2
HTH_IclR
HTH_20
HTH_10
Fe_dep_repress
HTH_23
Motif
Other DBs
NCBI-ProteinID:
APL93406
UniProt:
A0A1L5BKR6
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Position
complement(417040..417936)
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AA seq
298 aa
AA seq
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MLDYPALAAVSAVVREGTFERAAERLGVTPSAVSQRIRTLEERLGSIVIVRGQPCLPTDL
GRKLCAHFDQVQLLEADLAPVLSFMGDQLDTPVTLKVAVNSDSIATWFPEAAAKFSRETG
YLLEFIIEDEAHTADRLRSGEVIAAVSADPGTVQGCKTIELGSLQYLACCSPEFAQRHFP
NGVSAEALRRAPCLRFERRDGLQARWVRETHGIELDAPMHWVPSTFGFLNFGLAGMAWGM
HPAMIAKPRIADGRLIELTPATPLNVTLYWTVTRLHASALRTFTDAVRSTAKARLFQA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcttgattatcctgctcttgctgctgtttcggccgtcgtgcgcgaaggaacttttgaa
cgggcggccgaaaggcttggtgtgacgccgtccgcagtgtcccaacgtatccgcacgctt
gaggaacgactgggcagtatcgttatcgtgcgagggcagccgtgcctgcctaccgatctt
ggccggaaactctgcgcccatttcgatcaggtgcagcttctggaagcggatctagcgccc
gtactgtcgttcatgggggatcagttggacactcccgtcacgctgaaagtggcggtcaac
tccgacagcattgccacatggttccccgaggcggctgcgaagttctcccgtgaaacgggt
tatctcttggagttcatcatcgaggacgaggcgcacacggcggaccggcttcgctccggt
gaagtcattgccgctgtctcggcagaccccggcaccgtccagggatgtaaaacgatcgaa
ctgggcagcctgcaatatctggcttgttgcagcccggagttcgcacagcgccactttccg
aacggtgtttccgcagaagccctgcgccgtgctccgtgcctgcgctttgagcgcagggac
ggcttgcaggcgcgttgggtgagagaaacgcacggcatcgaactcgatgcgccaatgcat
tgggtgccatcgacctttggcttcctgaatttcggactcgcgggcatggcttggggcatg
cacccggcgatgatagcgaagcctcgaatagcagacggccggctcatcgaactgacacca
gccacgcccctgaacgtaacattgtactggaccgtcacacgattacacgcatccgcgctt
cgaacattcaccgatgccgtgcgcagcactgcgaaggcgcggttgtttcaggcctga
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