Sphingobium indicum B90A: SIDU_02455
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Entry
SIDU_02455 CDS
T04604
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sinb
Sphingobium indicum B90A
Pathway
sinb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sinb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SIDU_02455 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sinb03019
]
SIDU_02455 (groEL)
03110 Chaperones and folding catalysts [BR:
sinb03110
]
SIDU_02455 (groEL)
03029 Mitochondrial biogenesis [BR:
sinb03029
]
SIDU_02455 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sinb04147
]
SIDU_02455 (groEL)
Enzymes [BR:
sinb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SIDU_02455 (groEL)
Messenger RNA biogenesis [BR:
sinb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SIDU_02455 (groEL)
Chaperones and folding catalysts [BR:
sinb03110
]
Heat shock proteins
HSP60 / Chaperonin
SIDU_02455 (groEL)
Mitochondrial biogenesis [BR:
sinb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SIDU_02455 (groEL)
Exosome [BR:
sinb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SIDU_02455 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
SIDU_02455 (groEL)
Exosomal proteins of breast cancer cells
SIDU_02455 (groEL)
Exosomal proteins of colorectal cancer cells
SIDU_02455 (groEL)
Exosomal proteins of bladder cancer cells
SIDU_02455 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
APL93474
UniProt:
A0A1L5BKS9
LinkDB
All DBs
Position
493302..494933
Genome browser
AA seq
543 aa
AA seq
DB search
MPAKDVKFSRDAREGIARGVDILANAVRVTLGPKGRNVLINKSFGAPRITKDGVTVAREI
ELSDKFENMGAQMLRAVASKAQDHAGDGTTTATVLAQAIVREGMKSVSAGVDPMDLKRGI
DIAVAAVVAELKARSKPVSNNQEIAQVGIVSANGDEVVGRKIAEAMEKVGKEGVITIEEA
TGVEFELDVVEGMQFDRGYLSPYFITNPERSLVEFQDPYILIHEKKLGALHALLPILEAV
VQAGRPLLIIAEDIQGESLATLVVNKLRGSLNVAAVKAPGFGDRRKAMLEDIAVLTGGNL
ITEDLGIKLETVTLDMLGQAKRITIDKDTTTIVDGAGDANVIKGRIDALRSQVENTASDY
DREKVQERLAKLAGGVAVIKVGGVSETEVKERKDRVDDALHATRAAVEEGVVPGGGTALL
YASKALHGLNPVNDDQRRGIDIVRKALQAPLRQIAENAGHDGGVIAGRLLDARDENMGFN
AQTEQYENLFQSGVIDPTKVVRIALQDAASVAGLLITTEAAVAEFTNESSTPSMTGGIGG
MSF
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgccagccaaagacgtcaaattctcgcgcgacgcccgcgaaggcatcgcccgtggtgtc
gatattctcgccaatgccgtccgcgtgacgctcggtcccaaaggccgcaacgtcctcatc
aacaaaagcttcggggcgccgcgcatcaccaaggacggcgtgacggtcgccagggaaatc
gagctgagcgacaaattcgagaatatgggggcgcagatgctccgggcggtcgcgtccaag
gcgcaggatcatgccggcgacggcacaaccaccgcgacggtgcttgcccaggccatcgtg
cgcgaaggcatgaaatcagtctccgcgggcgttgatcccatggatctcaagcgcggcatc
gacattgcagtggccgctgtcgtggccgagctcaaggcgcgctcgaagccggtctccaac
aatcaggagattgcgcaggtcggcatcgtctcggccaatggcgacgaggtcgtcggtcgc
aagatcgccgaagcgatggaaaaggtcggcaaggaaggcgtcatcacgattgaggaagcg
acgggcgtcgagttcgagctggacgtggtcgaaggcatgcaattcgaccgtggctatctt
tcgccctacttcatcaccaacccggaaaggagcctggtcgagtttcaggatccctatatc
ctgatacacgagaagaagctcggtgctctccatgcgctgctcccgatcctggaagcggtg
gttcaggcgggtcgacccctgctcatcatcgccgaagacattcagggggagtctctcgcc
acgctcgtcgtcaacaagctgcgcggcagcctgaacgtcgccgccgtcaaggcgccgggg
ttcggcgatcggcgcaaggcgatgctcgaagatattgcggttcttaccggaggcaacctc
atcaccgaggatctcggcataaagctcgagaccgtgacgctggacatgctcggacaggcc
aagcgtatcacgatcgacaaggacacaacgaccatcgtcgacggcgccggagacgcgaat
gtgatcaaggggcgtatcgatgcgctccggtcgcaggtcgagaacaccgccagtgattat
gatcgcgagaaggtgcaggagcggcttgcaaagcttgctggtggcgtcgccgtcatcaaa
gtgggcggcgtgtcagaaaccgaagtgaaggagcgcaaggatcgcgtcgacgacgcgctg
catgcaacgcgtgcggcggtggaagaaggcgtcgtgccgggcggcggcaccgccttgctc
tacgcctccaaggcgctgcatggcctcaatcctgtcaatgacgatcagcggcgcggcatc
gacatcgtccgcaaggcacttcaggctccgttgcggcagatcgccgaaaatgccgggcat
gatggtggcgtgatcgcgggccgcctgcttgatgcgcgcgacgagaatatgggattcaat
gcccagaccgagcaatatgagaacctcttccaatccggcgtgatcgacccgacgaaggtc
gtccggatcgctttgcaggacgcggcctcggttgcgggcctgttgatcaccaccgaagcg
gctgttgcggagttcaccaacgaaagcagcacgccatccatgaccggcggcatcggtggc
atgagtttctga
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