Sphingobium indicum B90A: SIDU_02730
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Entry
SIDU_02730 CDS
T04604
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sinb
Sphingobium indicum B90A
Brite
KEGG Orthology (KO) [BR:
sinb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sinb03016
]
SIDU_02730
Enzymes [BR:
sinb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SIDU_02730
Transfer RNA biogenesis [BR:
sinb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SIDU_02730
Prokaryotic type
SIDU_02730
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
APL93522
UniProt:
A0A1L5BL57
LinkDB
All DBs
Position
complement(551008..551754)
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AA seq
248 aa
AA seq
DB search
MARFAFTVEFDGRPFMGWQRQAHGPSVQQAMEDAIFSVTGERVAVHAAGRTDAGVHGLGM
RAHADIAKDMTPFRLMEALNARLRPAPVAILACETVPDDWHARFSCTGRSYVYRIVNRRA
PLTWESGLAWRVIQPLDAEAMQRAAQLLVGRHDFTTFRSVHCQAESPVKTLDRLDVERAG
DRLAIHAEARSFLHHQVRSMVGCLVMVGMGRWSLGDLEAARDAKDRAALGLNAPPDGLYF
VSAHYPNA
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtttcgccttcaccgtcgaattcgatggccgccccttcatgggctggcaacgg
caggcccatggaccgagcgtgcagcaggcgatggaggacgccatcttctccgtcaccggc
gaacgggtcgccgtgcatgcggcgggccgcaccgatgccggcgtccacggccttggcatg
cgcgcccatgccgacattgcgaaggacatgacgccgttccgcctgatggaggcgctgaat
gcgcgccttcgaccagcgccggtcgcgatcctcgcttgcgagaccgtgccggacgactgg
catgcgcgcttctcctgcaccggccgctcctatgtctatcgcatcgtcaaccgccgcgcc
ccgctgacctgggaaagcggactggcctggcgggtgatccagccgctggatgcggaggcg
atgcagcgggccgcgcaactgctggtcggtcggcacgacttcacgaccttccgctcggtc
cattgccaggcggaaagcccggtgaagacgctcgaccggctggacgtggagcgcgcgggc
gaccgcctagccatccatgcggaggcgcgatccttcctgcaccatcaggtgcggtcgatg
gtgggatgcctcgtcatggtcggcatggggcgctggtccctcggcgatctggaagcggcg
cgggatgcgaaggaccgggcggccctggggctgaacgcgccgccggacgggctgtatttc
gtgagcgcgcactatcccaacgcgtga
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