KEGG   Sphingobium indicum B90A: SIDU_03225
Entry
SIDU_03225        CDS       T04604                                 
Name
(GenBank) type II secretion system protein GspD
  KO
K02453  general secretion pathway protein D
Organism
sinb  Sphingobium indicum B90A
Pathway
sinb03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sinb00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    SIDU_03225
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sinb02044]
    SIDU_03225
Secretion system [BR:sinb02044]
 Type II secretion system
  General secretion pathway protein
   SIDU_03225
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: APL93609
UniProt: A0A1L5BL69
LinkDB
Position
655965..658145
AA seq 726 aa
MTRKPLLSAAMALALAAPIASPVMAQQTLNVRDADIRAFIQDAARVTGRTFIIDNRVSGK
VSVVTDRPLSRSEYFEIFLSTLRANGLVAVPAPGGAYRIQPADGAAGQPSAVGRAANRNQ
FVTEVFRLRSIDAASALETLRPLVSKDGSVTANRAGNSVVVADYADNIGRIRQVIARIDR
DTASTTTVVLKNAGAREIATSLQALVTTGGEGAAKPATVVPIDSSNAVAIRGDAGTVARL
AQMARDLDRQAASGTEIRVYWLEHADAEKLLPVLQQLVGQATASPVTASTPAAGTPPSAA
PAAASTVMAGSGGSGGNGISSRGPAIVTRYEGANAIIVAANSDVQRMLGETIRQIDTRRE
QVLVEAIIVEISDAAAKKLGVQFLIGSTKTGFAATNYSNASPNILTLAGAIAADRLGETT
TTVVAPDGTRTETRTRENGDLANTLQQAAVDSLMNATGGFGGVATSLGRNGIFGAIINAV
KSDTDSNILSTPSVMTLDNQKASILVGQQVPVTTGEALSQNFDNQFRTVQRQDVGIKLEV
KPQINTGGAIKLFLKQEVSSVAGPVSNNNSDLIINKREIETTVTVDDGEILALGGLLDDN
ERKTIERIPLLSDIPGLGELFKSRSKSRTKTNLMVFIRPTILRSKEDAQKLTQQRYGYIR
GMQLLRNPEQEPSIDELVRDYMGSAPPAAAPQPGDAVARPPAEIIEPTARQSSGVVRPVP
PSEAKP
NT seq 2181 nt   +upstreamnt  +downstreamnt
atgaccagaaaaccgcttctttccgccgccatggccctcgcgctggcggctcccatcgca
tcgccggtcatggcgcagcagacgctgaacgtgcgcgacgccgacatccgcgccttcatc
caggacgcggcgcgggtgacggggcggaccttcatcatcgacaaccgcgtgtcggggaag
gtttccgtcgtgaccgaccggcccctgtcgcggtccgaatatttcgagattttcctgtcg
accctgcgggcgaacggactggtggcggtgccggcgccgggcggcgcctatcgcatccag
ccggcggacggcgcggcgggccagcccagcgccgtgggccgggcggccaatcgcaaccag
ttcgtgacggaggtgttccgcctgcgctccatcgacgcggcgagcgcgctggaaacgctg
cggccgctggtcagcaaggatggttcggtgacggcgaaccgggcgggcaacagcgtggtc
gtggccgactatgccgacaatatcgggcgcatccggcaggtgatcgcgcggatcgaccgg
gatacggcctcgaccaccacggtcgtgctgaaaaatgccggggcgcgggagatcgcgacg
tccctgcaggcgctggtgacgacgggcggggaaggggcggcgaagcccgcgaccgtcgtg
ccgatcgacagcagcaacgccgtcgcgatccggggcgacgccgggacggtggcgcggctg
gcgcagatggcgcgcgacctggaccggcaggcggccagcgggaccgaaatccgcgtctac
tggctggaacatgccgatgccgaaaagctgctgccggtgttgcagcaactggtgggccag
gcgaccgcttcgcccgtgaccgcttcaaccccggccgccggaaccccgccctccgccgcg
cctgccgccgcctcgaccgtgatggcggggtcgggcggttcgggcggcaacgggatttcg
tcccgcgggcctgccatcgtcacccgctatgaaggcgccaatgcgatcatcgtcgcggcg
aacagcgacgtgcagcggatgctgggcgagacgatccgccagatagacacgcggcgcgaa
caggtgctggtggaggcgatcatcgtcgagatcagcgacgccgccgccaagaagctgggc
gtgcaattcctgatcggcagcaccaagaccggttttgccgcgaccaattattccaatgct
tcgcccaatatcttgacgttggcaggcgcgatcgccgccgatcggctgggcgagacgacg
acgaccgtcgtggcgccggacggcacccgaacggagacgaggacgcgggaaaatggcgac
cttgctaatacgctgcagcaggcggcggtcgacagcctgatgaatgcgaccggcggcttc
ggcggggtggcgacgtcgctggggcggaacgggattttcggcgcgatcatcaatgccgtc
aaatccgacaccgacagcaacatcctctccacgccctccgtgatgacgctggacaaccag
aaggcgtcgatactggtcggccagcaggtgccggtgacgacgggcgaggcgctgagccag
aatttcgacaaccagttccgtaccgtccagcggcaggatgtcggcatcaagctggaggtg
aagccccagatcaacaccggcggcgcgatcaagctgttcctgaagcaggaagtgtccagc
gtcgccgggccggtgtcgaacaacaacagcgacctcatcatcaacaagcgcgagatcgag
acgaccgtgacggtcgacgatggcgagatattggcgctgggcggcctgctggacgacaat
gagcgcaagacgatagagcgcattccgctgctgtccgacattcccggccttggcgaactg
ttcaagtcgcgcagcaagagccggaccaagacgaacctgatggtcttcatccgccccacc
atcctgcggtcgaaggaggatgcgcagaaactgacgcagcagcgctacggctatattcgc
ggcatgcagttgctgcgcaatccggaacaggagccgagcatcgacgaactggtgcgcgac
tatatgggttcggctcctccggccgcagcgccgcagccgggcgacgccgtggcgcggccg
cccgccgagatcatcgaaccgaccgcccgccagtcgagcggcgtggtgcggcccgttccg
ccaagtgaggcaaagccgtga

DBGET integrated database retrieval system