Sphingobium indicum B90A: SIDU_03960
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Entry
SIDU_03960 CDS
T04604
Name
(GenBank) 1-deoxy-D-xylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
sinb
Sphingobium indicum B90A
Pathway
sinb00730
Thiamine metabolism
sinb00900
Terpenoid backbone biosynthesis
sinb01100
Metabolic pathways
sinb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sinb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
SIDU_03960
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SIDU_03960
Enzymes [BR:
sinb01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
SIDU_03960
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Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
E1_dh
Transketolase_N
TPP_enzyme_C
Transketolase_C_1
Motif
Other DBs
NCBI-ProteinID:
APL96227
UniProt:
A0A1L5BTR6
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Position
complement(817278..819203)
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AA seq
641 aa
AA seq
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MNDRPSTPLLDQVVWPADLRKLQPDRLRQLADELRQEVISAVGVTGGHLGSGLGVVELTT
AIHYVFDTPNDKLVWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRAESEYDPFGAA
HSSTSISAALGFAVANRMQGKPGKGIAVIGDGSMSAGMAYEAMNNAREAGNRLIVILNDN
DMSIAPPVGGLSAYLARLVSSREFLGLRDLAKRLARRLPRPLHNAARKTDEFARGMAMGG
TLFEELGFYYVGPIDGHNLDQLIPVLENVRDAAEGPCLVHVVTQKGKGYAPAEAAADKYH
GVQKFDVITGAQAKAPPGPPSYTGVFAKALIAEAERDPAICAITAAMPSGTGLDKFGAAF
PDRTFDVGIAEQHAVTFAAGLAAQGMRPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFAID
RAGLVGADGSTHAGSFDVTYLASLPNFVVMAAADEAELVHMVHTCAVHDDGPIAVRYPRG
NGTGIALPATPERLEIGKGRIVREGRQVAILSLGTRLEEALKAAETLEAKGLSTTVADLR
FAKPLDEALIRRLLTTHEVAVTIEEGSIGGLGAHVLTMASDQGLIDNGLKLRTMRLPDIF
QDQDKPENQYADARLDAGAIVDTVLTALRHNSAGIGTEARA
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcgcccctccacgccgctgctcgaccaggtcgtctggcccgcggacctgcgc
aagctgcaacccgaccggcttcggcaactggccgacgaactgcggcaggaagtgatttcc
gccgtcggcgtgaccggcggccatctggggtccgggctgggcgtggtggagctgaccacg
gcgatccattatgtgttcgacacgcccaacgacaagctggtctgggatgtcggccaccaa
tgctatccgcacaagatattgaccgggcggcgggaccgcatccgcaccttgcgccaaggc
ggcggcctcagcggcttcaccaagcgggcggagagcgagtacgaccccttcggcgcggcg
catagctcgacctcgatcagcgcggcgctgggctttgccgtggcgaacaggatgcagggc
aagcccggcaagggcatcgccgtcatcggcgacggctccatgtcggcgggcatggcctat
gaggcgatgaacaatgcgcgagaggccggaaatcggctgatcgtcatcctgaacgacaat
gacatgtccatcgctcctccggtcggcgggctgtcggcctatctggcgcggctggtgtcg
agccgggagttcctcggcctgcgtgatttggccaagcggctggcgcggcggctgccccgc
ccgctccacaatgcggcgcgcaagaccgacgaattcgcccgcggcatggcgatgggcggg
actttgttcgaggaactgggcttctattatgtcgggccgatcgacgggcataatctggac
cagttgatcccggtgctggaaaatgtccgcgacgcggcggaggggccatgcctggtccat
gtcgtgacgcagaagggcaagggctatgccccggccgaggcggcggcggacaaatatcat
ggcgtgcagaaattcgacgtcatcaccggcgcgcaggccaaggcgcctccggggccgccc
agctataccggcgtgttcgccaaggcgctgatcgcggaagcggagcgcgaccccgccata
tgcgcgatcaccgccgccatgccttcggggacgggactggacaagttcggcgcggccttc
cccgaccggaccttcgacgtcggcattgccgagcagcatgccgtgaccttcgcggcgggg
ctggcggcgcaggggatgcggccattctgcgccatctattcgaccttcctgcaacgcgcc
tacgaccaggtcgtgcatgacgtggcgatccagaatctgccggttcgcttcgccatcgac
cgcgccggtctggtgggggcggacggttcgacccatgcgggcagcttcgacgtgacctat
cttgccagcctgccgaatttcgtcgtcatggcggcagcggacgaggcggaactggtccat
atggtccacacctgcgccgtgcatgacgatgggccgatcgcggtgcgctacccgcgcggc
aacggcacgggcatcgccctgcccgcaacgccggaaaggctggaaatcggcaagggcagg
atcgtgcgggaggggcggcaggtcgcgatcctgtcgctcggaacccggctggaggaggcg
ctgaaggccgcggagacgctggaggcgaaggggctgtccacgacggtggcggacctgcgc
tttgccaagccgctggacgaagcgctgatccgcaggctgctgacgacccatgaagtcgcc
gtcaccatcgaggaaggatccatcggcgggcttggcgcgcatgtgctgacgatggcgagc
gaccagggattgatcgacaatggcctgaagctgcggaccatgcgcctgcccgacatcttt
caggatcaggacaagccggaaaatcaatatgccgacgcccgtctggatgcgggagccatt
gtcgacacggtgctgacggcgctccgccataacagcgccggcattgggaccgaagcgcgg
gcctga
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