Sphingobium indicum B90A: SIDU_04185
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Entry
SIDU_04185 CDS
T04604
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
sinb
Sphingobium indicum B90A
Pathway
sinb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sinb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SIDU_04185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sinb03400
]
SIDU_04185
DNA repair and recombination proteins [BR:
sinb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SIDU_04185
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SIDU_04185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
APL96232
UniProt:
A0A1L5BTV7
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Position
862552..863286
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AA seq
244 aa
AA seq
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MATLITPALVCALRPHGEHGAIARLLTPGHGLLAGYVRGGRSRRLRPVLLPGNAVKAEFR
ARTEEQLAGLTVELEHSRAPLLAEPLPAAAIDWACALTAVALPEGTPYPALHQALDGVLG
AVEAAPAARGWATALIRYELLLLAELGFGLDLGRCAATGGNDDLAYVSPRSAAAVSRAGA
VGYEDRLLPLPAFLLEGGAGEWPAILDGLRLTGFFLERSVLTDWRADVLAARERLVDRLK
RAVA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgctgatcaccccggccctggtctgcgcgctgcgcccacatggcgaacatggg
gcgatcgcgcgtcttctgactcctggccatggcctgctcgccggctatgtgcggggcggg
cgctcgcgtcggttgcgccccgtgctgttgccgggcaatgccgtgaaggccgagttccgc
gcccggacggaggagcaattggccggactgaccgtcgaactggagcacagccgcgccccg
ctcctggcggagccgttgccggcggcggcgatcgattgggcctgcgcgctcaccgcggtc
gccttgccggaagggacgccctatcccgcgctccatcaggcgctggacggcgtgctgggc
gcggtggaggcggcgccggcggcgcggggctgggccacggcgctgatccgttacgaattg
ctgctgctggcggaactgggcttcgggctggacctcggccgttgcgcggcgaccggcggg
aatgacgatctggcctatgtctccccgcgcagcgcggcggcggtcagccgggcgggcgcc
gtcggctatgaggaccggctgctgcccttgcccgctttcctgctggagggcggggcagga
gaatggcccgccatattggacggcttgcggttgaccggcttcttcctcgaacgctccgtc
ctcaccgattggcgcgccgatgtgttggcggcgcgggagcgcttggtggacaggctgaaa
agagcggtcgcctaa
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