Sphingobium indicum B90A: SIDU_04505
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Entry
SIDU_04505 CDS
T04604
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sinb
Sphingobium indicum B90A
Pathway
sinb03030
DNA replication
sinb03430
Mismatch repair
sinb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sinb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SIDU_04505
03430 Mismatch repair
SIDU_04505
03440 Homologous recombination
SIDU_04505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sinb03032
]
SIDU_04505
03400 DNA repair and recombination proteins [BR:
sinb03400
]
SIDU_04505
Enzymes [BR:
sinb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SIDU_04505
DNA replication proteins [BR:
sinb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SIDU_04505
DNA repair and recombination proteins [BR:
sinb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SIDU_04505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_5
AAA_assoc_2
AAA_30
Cdc6_lid
AAA_16
AAA_14
AAA_19
DUF815
Glyco_tranf_2_5
AAA_18
Adeno_E1B_55K_N
AAA_24
PIF1
Motif
Other DBs
NCBI-ProteinID:
APL93831
UniProt:
A0A1L5BLN3
LinkDB
All DBs
Position
943142..944752
Genome browser
AA seq
536 aa
AA seq
DB search
MSDSPQPYRVLARKYRPRNFSELIGQDAMVQTLGNAIRRGRLAHAFLMTGVRGVGKTSTA
RLIAKALNCVGPDGQGGPTIDPCGLCEPCMAIGEGRHIDVLEMDAASHTGVDDIRSIIDI
AGKGAYSARYKIYIIDEVHMLSRNAFNALLKTLEEPPEHVKFVLATTEVNKVPVTVLSRC
QRFDLRRIPAELLAAHFAHVVEAESVAAEPDALALIAQAAEGSARDGLSILDQAIAHAEM
GEGAPLVTAAQVRDMLGLSDRGATRRLLGLLLEGDTGVLLGAVRDQYALGVEPLSLMRGL
LELVHAVTLVKAGRDIANPGQSAEEREALADWASQLGFAPLHRLWQLLLKGHDEVASAAL
PIESCEMALLRVMHAATMPDPGEIARLIREGAPAAAAPGEGGAAAPSPAPAATLPASFEE
LIEAFWQRGKGQLAQELHDCIGVVRYAAPELDYAPTPSLPSDFLARLNPALREVTGTAWR
VNAVDGPAAPTLLEQEMRKAADARAEIMETPVVKAALAAFPDAELGDGLEQWSAER
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattcccctcagccctatcgcgtccttgcgcgcaaatatcgcccgcgcaatttc
agcgaactgatcgggcaggacgcgatggtccagacgctgggcaatgcgatccgccggggt
cgcctggcccatgccttcctgatgaccggcgtgcgcggcgtggggaagacctccaccgcc
cgcctcatcgccaaggcgctgaactgcgtcggcccggacgggcagggcggtcccaccatc
gatccctgcggcctctgcgaaccctgcatggccattggcgaggggcggcatatcgacgtt
ctggagatggacgccgccagccataccggcgtcgacgatattcgttcgatcatcgatata
gcgggcaaaggcgcctattcggcccgatacaagatttatatcatcgatgaagttcacatg
ctttcccgcaatgctttcaatgctttgctgaagacgctggaggagccgcctgaacatgtg
aagttcgtgctggcaacgacggaggtgaacaaggtgccggtgacggtgctgtcgcgctgc
cagcgcttcgacctgcgccgcatccccgctgaactgctcgccgcccatttcgcccatgtg
gtggaggcggaatcggtcgccgccgaacccgatgccctggccctcatagcccaggccgcc
gaaggctccgcccgcgacggcctctccatcctcgaccaggccatcgcccatgccgaaatg
ggcgaaggcgcgccgctcgtcaccgccgcgcaggtccgcgacatgctgggcctttccgac
aggggcgccacgcgtcgcctgctcggcctgctgctggagggcgacaccggcgtgctgctg
ggcgcagtgcgcgaccaatatgcgctgggcgtggagccgctctcgctgatgcgcggcctg
ctggaactggtccatgccgtgacgctggtgaaggcgggccgcgacatcgccaatcccggc
cagtcggcggaggagcgcgaggcgctggccgactgggcgtcgcaactcggcttcgcgccg
ctgcatcggctttggcagttgctgctgaagggccatgacgaggtcgccagcgccgcgctg
cccatcgaaagctgcgaaatggcgctgctgcgcgtgatgcacgccgcgaccatgcccgac
cccggcgagatcgcccgcctgatccgggaaggcgcgccagccgccgccgcgccgggcgag
gggggcgcagccgccccatccccggcgcccgccgccacgctccccgccagcttcgaggaa
ctgatcgaggctttctggcagcgcggcaagggccagctcgcgcaggaactgcacgattgc
atcggcgtcgtccgctatgccgcgccggagctggactatgccccgacgccttccttgccg
tccgatttccttgcccgcctcaacccggcgctgcgcgaggtcaccggcacggcctggcgc
gtcaatgccgtcgacggccccgccgcgcccaccctgctggagcaggaaatgcgcaaggcg
gcggacgcccgcgcggaaatcatggaaaccccggtggtcaaggcggcgttggccgctttc
cccgatgccgagcttggcgacgggctcgaacaatggagcgcagagcgatga
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