Sphingobium indicum B90A: SIDU_04520
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Entry
SIDU_04520 CDS
T04604
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
sinb
Sphingobium indicum B90A
Brite
KEGG Orthology (KO) [BR:
sinb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sinb03032
]
SIDU_04520
03036 Chromosome and associated proteins [BR:
sinb03036
]
SIDU_04520
03400 DNA repair and recombination proteins [BR:
sinb03400
]
SIDU_04520
DNA replication proteins [BR:
sinb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SIDU_04520
Chromosome and associated proteins [BR:
sinb03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SIDU_04520
DNA repair and recombination proteins [BR:
sinb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SIDU_04520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
DUF2267
GTP_EFTU_D2
Glyco_transf_29
Motif
Other DBs
NCBI-ProteinID:
APL93834
UniProt:
A0A1L5BLU5
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All DBs
Position
947776..948048
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AA seq
90 aa
AA seq
DB search
MNKQDLISAVAESSGLSKSDASKAVEGVFDAITGALKKGDEVRLVGFGTFSVSQRKASTG
RNPRTGETMTIKASAQPKFKAGKGLKDSVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcaggatcttatcagcgcagtcgctgaaagcagcggcctttccaagagcgac
gccagcaaggcagtcgagggcgttttcgacgccatcaccggagccctgaagaagggggat
gaagttcgcctggtcggtttcggcactttctccgtttcgcagcgcaaggcctcgaccggc
cgcaacccgcgcacgggcgagacgatgacgatcaaggcttcggcccagccgaagttcaag
gctggcaagggcctgaaggattcggtcaactaa
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