Sphingobium indicum B90A: SIDU_04595
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Entry
SIDU_04595 CDS
T04604
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
sinb
Sphingobium indicum B90A
Pathway
sinb03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
sinb00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
SIDU_04595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
sinb03011
]
SIDU_04595
Ribosome [BR:
sinb03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
SIDU_04595
Bacteria
SIDU_04595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
SH3_16
CsrA
Motif
Other DBs
NCBI-ProteinID:
APL93846
UniProt:
A0A1L5BLZ4
LinkDB
All DBs
Position
complement(963768..965480)
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AA seq
570 aa
AA seq
DB search
MASTAFPSRDDFAALLNDSLGGEDGGFEGRVVKGTVTGIENDMALIDVGLKSEGRVPLRE
FAAPGQKAELKVGDEVEVYVDRVENAHGEAMLSRDRARREAAWDKLESEFTENARVEGVI
FGRVKGGFTVDLDGAVAFLPGSQVDIRPVRDVTPLMDIPQPFQILKMDRRRGNIVVSRRA
ILEETRAEQRSGLIQTLAEGQIIEGVVKNITDYGAFVDLGGIDGLLHVTDLSYKRINHPN
EMINIGDTVRVQIIRINRDTQRISLGMKQLESDPWEGASAKYPVGAKLSGRVTNITEYGA
FVELEPGIEGLVHVSEMSWTKKNVHPGKIVSTSQEVDVIVLEVDPEKRRISLGLKQAQNN
PWDSFAERHPIGSTVEGEVKNATEFGLFIGLDGDVDGMVHMSDIAWGISGEDALALHRKG
ETVQAVVLDIDVEKERISLGMKQLERGGPAAGGTTAAAAGLNKNQTVTVTVLEVRDGGLE
VQAGEDGATGFIKRSDLGRDRDEQRPERFQIGQKFDAMVTGFDRAKKPTFSVKALQIAEE
KQAVAQYGSSDSGASLGDILGEALKAKSEG
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcctctacggcattcccctcgcgcgacgatttcgccgcgcttctcaatgattctctc
ggtggcgaggatggcggcttcgaaggccgcgtcgtcaagggcaccgttaccggcatcgaa
aacgacatggcgctgatcgacgtcggcctgaagtcggaaggccgcgtgccgctgcgcgaa
ttcgccgcgccgggccagaaggccgaattgaaggtcggcgacgaagtcgaagtctatgtc
gaccgcgtcgaaaacgcccatggcgaagccatgctgtcccgcgaccgcgcccgccgcgaa
gccgcctgggacaagctggaatccgaattcaccgaaaacgcccgcgtcgaaggcgtcatc
ttcggccgcgtcaagggcggcttcaccgtcgacctggacggcgcggtggcgttcctgccc
ggctcgcaggtcgacatccgtccggttcgcgacgtcacgccgctgatggacattccgcag
cccttccagatcctgaagatggatcgccgccgcggcaacatcgtcgtgtcgcgccgcgcc
atcctggaagaaacccgcgccgaacagcgcagcggcctcatccagacgctggccgagggc
cagatcatcgagggcgtggtcaagaacatcaccgattacggcgcgttcgtcgacctgggc
ggcatcgacggcctgctgcacgtcaccgacctcagctacaagcgcatcaaccaccccaac
gaaatgatcaacatcggcgacaccgtccgcgtccagatcatccgcatcaaccgcgacacc
cagcgcatcagcctgggcatgaagcagttggaaagcgatccgtgggaaggcgcttcggcc
aagtaccccgtcggcgccaagctgtcgggccgcgtcacgaacatcaccgaatatggtgcg
ttcgtcgagctggaaccgggcatcgaaggcctggtccacgtttcggaaatgtcctggacc
aagaagaacgtccaccccggcaagatcgtttcgaccagccaggaagtcgacgtcatcgtc
ctggaagtcgatcccgaaaagcgccgcatctcgctcggcctcaagcaggcccagaacaat
ccctgggacagcttcgccgaacgtcacccgatcggctcgaccgtcgagggcgaagtcaag
aacgcgaccgaattcggcctgttcatcgggctggacggcgacgtcgacggcatggtccac
atgtcggacatcgcctggggcatttcgggcgaggacgcgctggccctgcaccgcaagggc
gagacggttcaggccgtcgttctggacatcgacgtcgagaaggagcgcatcagcctgggc
atgaagcagcttgagcgcggcggcccggccgctggcggcaccaccgccgctgccgccggc
ctcaacaagaaccagacggtcaccgtcacggttctggaagtccgcgacggcggcctggaa
gtccaggccggcgaagacggcgccaccggcttcatcaagcgcagcgacctgggccgcgac
cgcgacgagcagcgtccggaacgcttccagatcggccagaagttcgacgccatggtcacg
ggtttcgaccgcgccaagaagccgaccttctcggtcaaggccctgcagatcgccgaagaa
aagcaggccgtggcgcagtacggatcgtccgacagcggcgcgtcgctgggcgacatcctg
ggcgaagcgctcaaggccaagagcgagggctaa
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