Sphingobium indicum B90A: SIDU_05780
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Entry
SIDU_05780 CDS
T04604
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
sinb
Sphingobium indicum B90A
Brite
KEGG Orthology (KO) [BR:
sinb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SIDU_05780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sinb03019
]
SIDU_05780
03009 Ribosome biogenesis [BR:
sinb03009
]
SIDU_05780
03036 Chromosome and associated proteins [BR:
sinb03036
]
SIDU_05780
Enzymes [BR:
sinb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
SIDU_05780
Messenger RNA biogenesis [BR:
sinb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SIDU_05780
Ribosome biogenesis [BR:
sinb03009
]
Eukaryotic type
90S particles
RNase
SIDU_05780
Prokaryotic type
rRNA processing factors
SIDU_05780
Chromosome and associated proteins [BR:
sinb03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
SIDU_05780
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Dicer_dsRBD
Motif
Other DBs
NCBI-ProteinID:
APL94055
UniProt:
A0A1L5BME1
LinkDB
All DBs
Position
complement(1232212..1232925)
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AA seq
237 aa
AA seq
DB search
MGVRGALEPHRGRLLTKADTEGWLKALIGHAPKDRTAFHQALTHGSAHAVNYERLEFLGD
RILGLLIAEWVYDRFSGEPEGKLSRRFNALVSGETCAEVARSAGVPAHLILGKQARDDGA
ADSDNVLGDVMEALIGALYLEGGLEEARTLVRRLWADRVDTQASAPKHPKSALQEWAAAN
KRKPPEYAMTDRSGPHHALKFTVTVSIKGAGEASATGGSKQEAETAAAKALLDQLTA
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtccgcggcgcgctggagccgcatcggggaaggcttttgacgaaagcggacacc
gaaggctggctgaaggccctgatcggccacgcgccgaaggatcggaccgccttccatcaa
gcgctgacccatggcagcgcccatgcggtgaactatgaacggctggagttcctgggcgac
cgcatcctcggcctgctgatcgccgaatgggtctatgaccgcttttcgggcgaaccggaa
ggcaagctctcccgccgcttcaatgcgctggtgtcgggcgagacctgcgccgaagtcgcc
cgcagcgccggggttccggcgcatctcatcctcggcaagcaggcccgcgacgacggcgcg
gccgacagcgacaatgtgctgggcgacgtgatggaggcgctgatcggcgcgctctatctg
gagggcggcctggaggaagcccgcaccctggtccgccgcctctgggccgaccgcgtcgac
acccaggcaagcgcccccaaacatcccaagtccgccctccaggaatgggccgccgccaac
aagcgcaagcccccggaatatgcgatgaccgaccgctccggcccccaccacgcgctgaaa
ttcacggtaacggtcagcatcaagggcgcgggcgaagcaagcgcgaccggcggctccaaa
caggaagcggaaaccgcagcggcaaaggcattgctggaccaactcaccgcttaa
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