Sphingobium indicum B90A: SIDU_06515
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Entry
SIDU_06515 CDS
T04604
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sinb
Sphingobium indicum B90A
Brite
KEGG Orthology (KO) [BR:
sinb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sinb03016
]
SIDU_06515
Enzymes [BR:
sinb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SIDU_06515
Transfer RNA biogenesis [BR:
sinb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SIDU_06515
Prokaryotic type
SIDU_06515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
APL94188
UniProt:
A0A1L5BN21
LinkDB
All DBs
Position
complement(1380284..1381204)
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AA seq
306 aa
AA seq
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MHGWIILDKPHGLGSTQAVSAVKRALRVSGAGKWKVGHGGTLDPLATGVLPIAVGEATKL
AGRMLDSDKIYDFTVRFGVQTDTLDLEGKEIAASDHRPTLAEVEAILPRFTGPIEQAPPA
YSAILIDGRRAYDLARKGEDVEMKTRAVTIHALAIKGQEAEGPEIGTRGLASVTLRAHVS
KGTYIRSLARDIALALGTVGHVTMLRRVKAGPFTLESAISLDKLDEAARGGGIAQLMLPL
TAGLDDIPALAVSPDEALALRQGKVLVGKPHTGLMLAMEGATPVALVEASGPEPLREIRV
VRGFNL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgcacggctggatcatcctcgataaaccccatggccttggctcgacgcaggcggtgagc
gcggtcaaacgcgccctgcgcgtcagcggcgcgggcaagtggaaggtcggccatggcggc
acgctcgatccgctggcgaccggcgtgctgcccatcgcggtcggggaggcgaccaagctc
gccgggcggatgctcgacagcgacaaaatctatgatttcaccgtccgtttcggcgtccag
acggacacgctggacctggagggcaaggaaatcgccgccagcgaccatcgcccgacgctg
gcggaggtggaggcgatattgccccgcttcaccggccccatcgaacaggcgccccccgcc
tacagcgccatcctgatcgacggccggcgcgcctacgacctcgcccgcaagggggaggat
gtggagatgaagacccgcgccgtcaccatccatgctctcgccatcaagggacaagaggcg
gaagggccagagatcgggacaagggggctcgcctccgtcaccctccgcgcccatgtctcc
aagggcacctatatccgctccctcgcccgcgacatcgcgctggcgctcggcacggtcggc
catgtcaccatgctccgccgcgtcaaggcagggccgttcaccctggaatccgcgatttcg
ctggacaaattggacgaagctgctaggggcggcggcatcgcgcagcttatgctgccgttg
accgcagggctggacgacatcccggctctcgcagtctctcccgacgaagcgctggctctc
cgacaggggaaggtgcttgtggggaaaccgcataccggtctcatgctggcgatggagggc
gcaacgcccgtcgcgctggtggaggccagtggcccagaaccccttagggaaatccgggtg
gtgcgcggcttcaatctctag
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