Sphingobium indicum B90A: SIDU_06550
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Entry
SIDU_06550 CDS
T04604
Name
(GenBank) transcription elongation factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
sinb
Sphingobium indicum B90A
Brite
KEGG Orthology (KO) [BR:
sinb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sinb03021
]
SIDU_06550
03009 Ribosome biogenesis [BR:
sinb03009
]
SIDU_06550
Transcription machinery [BR:
sinb03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
SIDU_06550
Ribosome biogenesis [BR:
sinb03009
]
Prokaryotic type
rRNA transcription factors
SIDU_06550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
S1
HHH_5
KH_2
KH_1
KH_NusA_C
KH_KhpA-B
RAD51D_N
CHASE2
Motif
Other DBs
NCBI-ProteinID:
APL94195
UniProt:
A0A1L5BMS5
LinkDB
All DBs
Position
complement(1387196..1388767)
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AA seq
523 aa
AA seq
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MANAISANKAELLAIANSVASEKMIDKAIVIEAMEDAIQRAARARYGAENDIRAKLDPET
GDLRLWRVVEVVEVVDDYFKQVDLRQAQKLKKDAVIGDFIVDPLPPIDLGRIDAQSAKQV
IFQKVRDAERERQHEEFKDRVGEIITGVVKSVEFGHVVVNLGRAEGVIRRDQQIPREVVR
VGDRIRSVILNVRRENRGPQIFLSRAHPEFMKKLFAQEVPEIYDGVIEIKAAARDPGSRA
KIGVISRDSSIDPVGACVGMKGSRVQAVVQEMQGEKIDIIPWSEDTATFVVNALQPAQVA
RVVIDEEEERIEVVVPDDQLSLAIGRRGQNVRLASQLTGKAIDIMTEADASEKRQKEFVA
RSEMFQNELDVDETLSQLLVAEGFGELEEVAYVGVEELAAIEGFDEDLAAELQSRAQEAL
DRREAAAREERQALGVEDALADMPHLTEAMLVTLGKAGIKTLDDLADLATDELVAKKRVD
QRRRRENKEEDKGGILAEYGLTEEQGNEIIMAARAHWFEGEEA
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgccatttccgccaacaaggccgaactgctcgccatcgccaattcggtggcc
agcgaaaagatgatcgacaaggccatcgtcatagaggcgatggaagacgcgatccagcgc
gccgcccgcgcccgctacggcgcggaaaacgacatccgtgccaagctggacccggaaacc
ggcgatctgcgcttgtggcgcgtggtcgaagtggtcgaggtcgtggacgattatttcaag
caggtcgacctgcgccaggcgcagaagctgaagaaggacgccgtgatcggcgacttcatc
gtcgacccgctgcctcctatcgacctgggccgcatcgacgcccagtcggccaagcaggtg
atcttccagaaggtccgcgacgccgagcgcgagcgccagcatgaggaattcaaggaccgc
gtgggtgaaatcatcaccggcgtcgtcaagtcggtcgaattcggccatgtcgtggtgaat
ctcggccgcgccgagggcgtcatccgccgcgatcagcagatcccccgcgaagtcgtccgc
gtcggcgaccgcatccgctcggtgatcctgaacgtgcgccgcgaaaaccggggtccgcag
attttcctcagccgcgcccatcccgaattcatgaagaagctgtttgcgcaggaagtgccc
gaaatctacgacggcgtgatcgagatcaaggccgccgcccgcgatccgggcagccgcgcc
aagatcggcgtcatcagccgcgattcgagcatcgacccggtcggcgcctgcgtcggcatg
aagggcagccgcgtgcaggccgtcgtgcaggaaatgcagggcgagaagatcgacatcatc
ccctggtcggaagacaccgccaccttcgtcgtcaacgcgctccagcccgcgcaggtcgcg
cgcgtcgtcatcgacgaggaggaggagcggatcgaggtcgtcgttcccgacgatcagctt
tcgctcgccatcggccgccgcggccagaatgtccgcctggccagccagctcaccggcaag
gccatcgacatcatgaccgaggccgatgcgtccgaaaagcgccagaaggaattcgtcgcc
cgctccgagatgttccagaacgaactggacgtggacgaaaccctctcgcagcttctggtg
gcggagggcttcggcgaactggaagaagtcgcctatgtcggcgtcgaggaactggccgcg
atcgagggcttcgacgaagaccttgccgccgaattgcagagccgcgcccaggaagcgctg
gaccgccgcgaagccgccgcccgtgaggaacgccaggcgctgggcgtcgaggacgcgctg
gccgacatgccgcacctcaccgaagccatgctggtgacgctgggcaaggcgggcatcaag
acgctggacgatctggccgatctcgccaccgacgaactggtcgcgaagaagcgcgtcgac
cagcgccgccgccgcgagaacaaggaagaggacaagggcggcatattggccgaatatggc
ctcaccgaggaacagggcaatgagatcatcatggccgcccgcgcccactggttcgaaggc
gaggaagcgtaa
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