Sphingobium indicum B90A: SIDU_07405
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Entry
SIDU_07405 CDS
T04604
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
sinb
Sphingobium indicum B90A
Pathway
sinb00220
Arginine biosynthesis
sinb00240
Pyrimidine metabolism
sinb00250
Alanine, aspartate and glutamate metabolism
sinb01100
Metabolic pathways
sinb01110
Biosynthesis of secondary metabolites
sinb01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sinb00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SIDU_07405
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SIDU_07405
00220 Arginine biosynthesis
SIDU_07405
Enzymes [BR:
sinb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
SIDU_07405
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Gene cluster
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Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_3
ATP-grasp_4
ATPgrasp_Ter
CoA_binding_2
RimK
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
APL94346
UniProt:
A0A1L5BNB5
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All DBs
Position
complement(1554028..1557363)
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AA seq
1111 aa
AA seq
DB search
MPKRTDISSILIIGAGPIIIGQACEFDYSGTQAVKALKEEGYRIILVNSNPATIMTDPEF
ADATYVEPITPEIVAKIIEKERPDAVLPTMGGQTALNTALALFNDGTLDKFGVKMIGADA
AAIDKAEDRLKFRDAMDKIGLESARSRIAHTMEEALEALEFTGLPSIIRPSFTLGGTGGG
VAYNKEEFKRIVAEGLDASPTTEVLIEESLLGWKEYEMEVVRDRNDNAIIICSIENVDPM
GVHTGDSITVAPALTLTDKEYQIMRNASIAVLREIGVETGGSNVQFAVNPKDGRLIVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDEIENDITGATPASFEPTIDYVVTKIPR
FAFEKFKGSEPLLGTAMKSVGEVMAIGRNIHESMQKALRGLETGLSGFNNVDHLEGAPKD
DIVAALAQPTPDRLLVAAQALREGLTVAEIHAIAKFDPWFLERIKEIIDAEAEILSNGLP
QDAEGMRRLKSMGFSDKRLAYLALKSANLRGMERGIARGSGLIHEAVKAMTGGVTEDEVR
ALRHRLGVRPVFKRIDTCAAEFEAKTPYMYSTYEAPIFGEAENEAQPSDRKKVVILGGGP
NRIGQGIEFDYCCVHACFALSEAGYETIMVNCNPETVSTDYDTSDRLYFEPLTAEDVLEI
LSVEMSNGTLAGVIVQFGGQTPLKLAQALEDAGVPILGTSPDAIDLAEDRERFAALIDKL
KLKQPANGIARSREEAIAVANRIGYPVLMRPSYVLGGRAMEIVDGQAQLEEYIATAVQVS
GDSPVLIDQYLRDAVEVDVDALCDGDDVVVAGVLQHIEEAGVHSGDSACSLPPYSLSDDI
IAEIERQADVLARALSVRGLMNIQFAVKDGVVYLIEVNPRASRTVPFVAKAIGTPIAKIA
SRVMAGEKLKDLPRIDRNAIGHIAVKEAVFPFARFPGVDPVLSPEMKSTGEVMGIDSDFA
TAFAKAQLGAGTILPKGGTVFVSVKDSDKPVILPAVQKMAALGFTIIATGGTARYLGEQG
IAVQPVNKVAEGRPHIVDRITDGDVDLIFNTTEGWQSLKDSKAIRTSALRAKVASFTTAA
ASVAAANAIEALRGHALEVRSLQSYYPVSQA
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaacgcaccgacatctcctccatccttatcatcggcgcgggcccgatcatcatc
ggccaggcttgcgagttcgactattcgggcacgcaggcggtgaaggcgctcaaggaagag
ggctatcgcatcatcctggtgaattccaacccggccaccatcatgaccgacccggaattc
gccgacgcgacctatgtcgagccgatcacgcctgaaatcgtggcgaagatcatcgaaaag
gaacgccccgatgcggtgctgccgaccatgggcggccagacggcgctcaacaccgcgctc
gccctgttcaacgacggcacgctggacaagttcggcgtcaagatgatcggcgccgacgcg
gccgccatcgacaaggccgaggaccggctgaaattccgcgacgcaatggacaagatcggc
ctggaatccgcccgctcgcgcatcgcacatactatggaagaagcgctggaagctcttgaa
ttcaccgggcttccgtccatcatccgccccagcttcacgctcggcggcaccggcggcggc
gtcgcttataacaaggaagagttcaagcggatcgtcgccgaaggcctcgacgcctcgccc
acgaccgaagtcctgatcgaagagtcgctcctcggctggaaggaatatgagatggaggtc
gtccgagaccggaacgacaatgccatcatcatctgttccatcgaaaatgtcgacccgatg
ggcgtccataccggcgattccatcaccgtcgcgcccgcgctgacgctgaccgacaaggaa
tatcagatcatgcgcaacgcgagcatcgcggtgctgcgtgaaatcggcgtggaaacaggc
ggttcgaacgtgcagttcgcagtcaatccgaaggatggccgcctcatcgtcatcgagatg
aacccccgcgtctcccgttcttcggcgctggcgtcgaaggcgaccggcttccccatcgcc
aaggtcgcggcgaagctggccgtcggctacacgctggacgagatcgagaacgacatcacc
ggcgcgaccccggccagcttcgaaccgaccatcgactatgtcgtgaccaagatcccgcgc
ttcgccttcgaaaagttcaaggggtccgagccgctgctcggcaccgcgatgaagtcggtg
ggcgaggtgatggccatcggccgcaacatccatgaatcgatgcagaaggcgctgcgcggc
ctggaaaccggcctttccggcttcaacaatgtcgatcatctggagggcgcgcccaaggac
gacatcgtcgctgccctggcccagccgaccccggaccgcctgctggtcgccgcgcaggcc
ctgcgcgaagggctgaccgtcgcggagatccacgccatcgccaagttcgatccctggttc
ctggaacggatcaaggaaatcatcgacgccgaggccgaaatcctgtcgaacggcctgccg
caggacgcggagggcatgcgccgcctgaaatccatgggcttctccgacaagcgcctcgct
tatctggcgctcaagtccgccaatctgcgcggcatggagcggggcatcgcgcgcggttcg
ggcctgatccacgaagcggtcaaggccatgaccggcggcgtcacggaggatgaggtccgc
gccctgcgccatcggctgggcgtgcgccccgtcttcaagcgcatagacacctgcgccgcc
gagttcgaggcgaagacgccctatatgtattcgacctacgaagccccgatcttcggcgag
gcggagaatgaggcgcagcccagcgaccggaagaaggtggtgatcctgggcggcggtccc
aaccggatcgggcagggcatcgagttcgactattgctgcgtccacgcctgcttcgcgctc
agcgaagcgggttacgagacgatcatggtcaactgcaatcctgagactgtatcaaccgac
tatgacacgtcggaccgtctctatttcgagccgctgacggccgaggacgtgctggaaatc
ctgagcgtcgaaatgtcgaacggcacgctggccggcgtcatcgtccagttcggcggccag
acgccgctcaagctggcgcaggcgctggaggatgcgggcgtgccgatcctgggcaccagt
cccgacgccatcgaccttgccgaagatcgcgagcggttcgccgccctcatcgacaagctc
aagctcaagcagcccgccaacggcatcgcccgcagccgcgaggaggccatcgccgtcgcc
aaccgcatcggctatccggtcctgatgcgcccgtcctatgtccttggcggccgcgccatg
gagattgtcgacggccaggcgcaactggaggaatatatcgccaccgccgttcaggtgtcg
ggcgactctccggtcctgatcgaccaatatctgcgcgacgcggtggaggtggatgtggac
gcgctttgcgacggcgacgacgtcgtggtcgccggcgtgctccagcatatcgaggaggcg
ggcgtccattccggtgactccgcctgctcgctgccgccctacagcctgtcggacgacatc
atcgcggagatcgagcgtcaggccgacgtcctggcccgcgccctgtcggtccgcggcctg
atgaacatccagttcgcggtcaaggatggcgtcgtttacctgatcgaggtcaacccccgc
gccagccggacggtgcccttcgtcgccaaggccatcggcacccccatcgccaagatcgcc
agccgcgtgatggcgggcgagaagctgaaagacctgccgaggatagaccggaacgccatc
ggtcatatcgcggtcaaggaagccgtcttccccttcgcccgcttccccggcgtcgatccg
gtcctctcgccggaaatgaagagcaccggcgaagtcatgggcatcgacagcgatttcgcc
accgccttcgccaaggcgcagctgggcgcggggaccatcctgcccaagggcggcacggtg
ttcgtgtcggtcaaggacagcgacaagccggtgatcctgcccgcggtgcagaagatggcg
gcgctgggcttcaccatcatcgccaccggcggcacggcccgctatctgggggagcagggc
atcgccgtccagccggtcaacaaggtggccgaagggcgccctcatatcgtcgacaggatc
accgacggcgacgtcgacctgatcttcaacacgacggaggggtggcagtcgctcaaggac
agcaaggcgatccgcaccagcgcgctgcgcgccaaggtcgccagcttcaccaccgcggcg
gccagcgtcgcggcggcgaatgcgatcgaggcgcttcgggggcatgcccttgaagtgcgt
tcgctccagtcctattatcctgtgtcgcaagcctga
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