Sphingobium indicum B90A: SIDU_08025
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Entry
SIDU_08025 CDS
T04604
Name
(GenBank) dicarboxylate--CoA ligase PimA
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sinb
Sphingobium indicum B90A
Pathway
sinb00061
Fatty acid biosynthesis
sinb00071
Fatty acid degradation
sinb01100
Metabolic pathways
sinb01212
Fatty acid metabolism
sinb02024
Quorum sensing
sinb04146
Peroxisome
Module
sinb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sinb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SIDU_08025
00071 Fatty acid degradation
SIDU_08025
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SIDU_08025
09145 Cellular community - prokaryotes
02024 Quorum sensing
SIDU_08025
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sinb01004
]
SIDU_08025
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sinb04147
]
SIDU_08025
Enzymes [BR:
sinb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SIDU_08025
Lipid biosynthesis proteins [BR:
sinb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SIDU_08025
Exosome [BR:
sinb04147
]
Exosomal proteins
Exosomal proteins of breast milk
SIDU_08025
Exosomal proteins of breast cancer cells
SIDU_08025
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
APL94448
UniProt:
A0A1L5BNR7
LinkDB
All DBs
Position
complement(1681428..1683134)
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AA seq
568 aa
AA seq
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MESNENIWKTRYNHPFPWEQTFPPLSMVDMVANSATAHPQAVMIDFMGRKTSYGEMWRTI
RRVARGLQDMGVRKGDRVGLYLPNVPHYVAAYYGAMMAGAIVVNYSPLYTAAELEHQVED
SGTKILFTLSASALLPTALEVLDNSSLERLVVGSVAEVLPPAKSVLFRLFKRKETSTVPH
DPRITHYADLLRHGEDPAPVAIEPEQDIALLQYTGGTTGMPKGAMLTHQNLTANARQVRL
IDPHLEAPDRILAVLPFFHVFANTCVLNRTVLNGGEMVMLPRFDGTQVLAAIQRTRATSL
PGVPTMYQALLDHPATPNIDFSSLRLCISGGAPLPLEVKQRFEAMTGATLVEGYGLTESS
PVLCCNPFEGLNKPGTVGQPVSGTRVKLVDREDPTRPSPEGEPGELVFDGPQIMKGYWQR
PDADKEVFVDGWLRTGDVGVIDADGYVKIVDRLKDMIAVGGFKVFPSEVEKVLYHHPAVK
EALVIGIPDHYRGECPKAFVTLQDGSDIDGAALKDWLNPQLGKHEKVCEVEVRLNLPTTL
VGKLSRKELVAEERAKAEAAARQTGTAG
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggagagcaacgaaaacatctggaaaacccgctataatcatccctttccgtgggaacag
acattcccgccgctatcgatggtggacatggtggcgaacagcgccacggcccacccgcag
gcggtgatgatcgacttcatgggccgcaagacgagctatggcgaaatgtggcgcaccatc
cggcgggttgccaggggcttgcaggatatgggcgtccggaagggcgaccgggtcggcctc
taccttcccaacgtgccccattatgtcgcggcctattatggcgcgatgatggccggggcc
attgtggtcaactattcccccctctacaccgccgccgaactggagcatcaggtcgaggat
agcggcacgaagatcctcttcaccctgtcggccagcgcgctgctgcccaccgcgctggag
gtgctggacaacagcagcctggagcggctggtcgtcggcagcgtcgcggaagtgctgccg
cccgccaagtcggtgctgttccgcctgttcaagcggaaggagacctccacggtcccgcac
gatccgcgcatcacccattatgccgatctgctgcgccatggcgaggatcccgcgcccgtg
gccatcgaaccggagcaggacatcgccctgctgcaatataccggcggcaccaccggcatg
cccaagggcgcgatgctgacccaccagaacctgacagccaatgcgcggcaggtgcgcctg
atcgatccccatctcgaagcgcccgaccgcatattggcggtgctgcccttcttccatgtc
ttcgccaatacctgcgtcctcaatcgcacggtgctgaacggcggggagatggtgatgctg
ccgcgtttcgacggcacgcaggtgctggcggcgatccagcggaccagggcgacctcgctg
cccggcgtgccgaccatgtaccaggcgctgctggatcatccggcgacgccgaatatcgac
ttttcctcgctgcgcctgtgcatttccggcggcgcgcccctgccgctggaggtcaagcag
cggttcgaggcgatgaccggggccacgctggtggagggatatggcctcaccgaaagcagc
ccggtcctctgttgcaacccctttgagggcctcaacaagcccggcaccgtgggacagccg
gtttccggcacgcgggtcaagctggtcgaccgagaagacccgacccgcccgtcccccgaa
ggcgaaccgggcgagctggtctttgacgggccgcagatcatgaagggctattggcagcgc
ccggacgccgacaaggaggtgttcgtcgacggctggctgcggaccggcgatgtcggagtg
atcgacgcggacggctatgtgaagatcgtcgaccggctgaaggacatgatcgctgtagga
ggcttcaaggtcttccccagcgaggtcgagaaagtcctctaccaccatccggcggtcaag
gaagcgctggtgatcggcattcccgaccattatcgcggcgaatgtcccaaggccttcgtg
accttgcaggacgggtcggacatcgatggcgcggcgctcaaggactggttgaacccgcaa
ctgggcaagcatgagaaggtgtgcgaggtggaggtgcgcctgaacctgcccacgacgctg
gtcggcaagctgtcgcgcaaggaactggtggccgaggagcgcgccaaggcggaggcggcg
gcgcggcagactggaaccgcgggctga
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