Sphingobium indicum B90A: SIDU_08070
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Entry
SIDU_08070 CDS
T04604
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sinb
Sphingobium indicum B90A
Brite
KEGG Orthology (KO) [BR:
sinb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sinb03016
]
SIDU_08070
Enzymes [BR:
sinb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
SIDU_08070
Transfer RNA biogenesis [BR:
sinb03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
SIDU_08070
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
APL94457
UniProt:
A0A1L5BNU6
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All DBs
Position
1691767..1692324
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AA seq
185 aa
AA seq
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MHRLFVAIRPPPAIRVRLLGLMHGIAGARWQDDDQLHLTLRFVGEVDRPQADDLADALGH
IRFSPFEIALSGVGCFDRKGQVHTLWAGVQPRDPLAQLHRKVDRACVRIGLPPDNRSYLP
HITLARFGRTAGPMEPFMALHAALASAPFTVDEFALYESQPGQTGSTYHMIERYGVQDHP
YPRSG
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgtcttttcgtcgccatccgccccccgcccgccatccgcgtccgattgctcggc
ctgatgcatggcatcgccggggcgcgctggcaggatgacgaccaactgcatctcaccctt
cgcttcgtgggcgaagtcgaccgcccgcaggccgacgacctggccgacgcgctgggccat
atccgcttttcgccgttcgaaatcgccctgtccggcgtcggctgcttcgaccgcaagggc
caggtccacacgctctgggcgggcgtgcagccccgcgaccccctcgcgcaacttcatcga
aaggtcgaccgcgcctgcgtccgcatcggccttcctcccgacaatcgaagctatttgccc
cacatcaccctggcgcgcttcggccggacagccggtccgatggaaccgttcatggccctc
cacgccgccctcgcaagcgcgcccttcacggtcgacgaattcgccctgtatgaaagccag
ccaggccagacaggttcgacctaccacatgatcgaacgctacggcgtgcaggaccacccc
tatccccgttcaggctga
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