Sphingobium indicum B90A: SIDU_08980
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Entry
SIDU_08980 CDS
T04604
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
sinb
Sphingobium indicum B90A
Brite
KEGG Orthology (KO) [BR:
sinb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sinb03400
]
SIDU_08980
DNA repair and recombination proteins [BR:
sinb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SIDU_08980
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DUF7125
Lon_C
AAA_16
DnaB_C
AAA_22
RecA_N
nSTAND_NTPase5
AAA
AAA_30
NACHT
Glyco_hydro2_C5
NTPase_1
nSTAND3
AAA_5
Rad51
MeaB
AAA_24
SLFN-g3_helicase
AAA_29
AAA_14
NPHP3_N
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
APL94626
UniProt:
A0A1L5BP42
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Position
complement(1860355..1861722)
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AA seq
455 aa
AA seq
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MAKAKRKFVCQQCGTVSGRWQGQCDDCGEWNSIVEEAAETVFSARHDLHSGGRALMLVGL
DDKVELPPRTTTGIAEFDRALGGGIVSGSATLIGGDPGIGKSTLLLQAAARIASAGHSVA
YISGEEASDQVRLRAQRLGLGNAPVQLASATSVRDILTTLGEGAPPALLIIDSIQTMHSD
LIEGAPGTVSQVRASSQELIRFAKQRGTALILVGHVTKDGSIAGPRVLEHMVDTVLSFEG
ERSHQYRILRAIKNRFGGTDEIGVFAMVAEGLEEVANPSALFLTHRDENVTGATVFPALE
GTRPVLVEIQALVVRLSSGATPRRAVVGWDSGRLAMVLAVLEARCGLSFSTCEVYLNVAG
GYRLSDPAADLAVAAALMSALSERPVPADVVLFGEIALSGEIRPVAHAPLRLREAAKLGF
NRAFVPAAVADGVKGISVSGYRALAQLVDQMLGRG
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcaaagcgcaaattcgtctgtcagcaatgcggcaccgtttccggccggtgg
caggggcagtgcgacgattgcggcgaatggaacagcatcgtcgaggaagcggcggagacg
gtcttttccgcccgccatgacctgcatagcgggggcagggcgctgatgctggtggggctg
gacgacaaggtggagctgccgccgcgcaccacgaccgggatcgcggaattcgaccgggca
ttgggtggcgggatcgtttccggttcggccacgctgatcggcggcgatccgggcatcggc
aagtcgacgctgctgttgcaggcggcggcgcgcatcgcttcggccgggcacagcgtcgcc
tatatcagcggcgaggaggcgtcggaccaggtccggctgcgcgcccagcgcctgggtctg
ggcaatgcgccggtgcaactggccagcgccacttccgtgcgcgacatactgaccacgctg
ggggagggcgccccgcccgcgctgctgatcatcgattcgatccagacgatgcacagcgac
ctgatcgagggcgcgccgggcacggtcagccaggtgcgcgcttccagccaggaactgatc
cgcttcgccaagcagcgcggcaccgcgctgatcctggtcggccatgtgaccaaggacggc
agcattgccggtccccgcgtgctggagcatatggtcgacacggtgttgagcttcgagggc
gagcgcagtcatcaatatcgtatcctgcgcgccatcaagaaccgctttggcggcacggac
gagatcggggtgtttgccatggtggcggaagggctggaggaggtcgccaacccctccgcc
ctgttcctcacgcatcgcgacgagaatgtgaccggcgcgaccgtgtttcccgcgctggag
gggacgcggccggtgctggtggagatccaggcgctggtggtgcggctttccagcggcgcg
accccccgccgcgccgtggtggggtgggacagcgggcggcttgccatggtgctggccgtg
ctggaggcgcgctgcggcctcagcttctcgacctgcgaagtctatctgaacgtcgcgggc
ggctatcgcctgtcggacccggcagccgaccttgccgtcgccgccgcgttgatgtcggcc
ctgtcggagcgtcccgtgcccgccgatgtcgtcctcttcggcgaaatcgcgctgtcgggg
gaaatccgtcccgtggcgcatgccccgctgcggctgcgggaagccgccaagctgggtttc
aaccgcgccttcgtccccgccgccgtggcggacggggtcaagggcatttcggtcagcggc
tatcgcgcccttgcgcaacttgttgaccagatgcttgggcgcggatag
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