KEGG   Sphingobium indicum B90A: SIDU_10875
Entry
SIDU_10875        CDS       T04604                                 
Name
(GenBank) transporter
  KO
K03199  type IV secretion system protein VirB4 [EC:7.4.2.8]
Organism
sinb  Sphingobium indicum B90A
Pathway
sinb03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sinb00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    SIDU_10875
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sinb02044]
    SIDU_10875
Enzymes [BR:sinb01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     SIDU_10875
Secretion system [BR:sinb02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   SIDU_10875
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG AAA_10 AAA_22 FtsK_SpoIIIE AAA_7 AAA_16 nSTAND3 ABC_tran TrwB_AAD_bind ATPase AAA_29
Other DBs
NCBI-ProteinID: APL94972
UniProt: A0A1L5BQC9
LinkDB
Position
complement(2264461..2266872)
AA seq 803 aa
MASAAAQLPPRKTPWRVLAREAEPGRYLPYARHVTPDVIALDSGDLMMMFRLEGLAFETA
DPIHLNDWHEKLNGTWRNIADDRLAIWTHIVRSAVGDYPEGQFRSKFAAELDGKYRARVT
AKRMFVNEHYLTLLMRPAVGSADRTGLLLKRIAKAKAAEEEVDPDELARFEEKARDIEKL
LRRCSPARLALYEHNGLIFSAPLEVLEQVMMGARSRVPLVRGHLGSALYGERVIFGRETV
EIRAHDASRWQGIFGIREYPALTRPGQMNALLGQDFAFVVSQSFTFMGKARAAERLRRRQ
NQMASTEDAAASQALDLADAADDLQSNRFVLGEHHFSLAVFADSQRRLADNLSAARAALA
DAGLVAAREGPALEAAFWAQLPGNFAWRARPAAITSRNFAALAPFHTYPAGRPKGNHWGP
AIAMMKTAAQSPYYFNFHVGDLGHTLIIGPSGAGKTVVQNFLMAQLEKTGAQQIFIDKDR
GAEIYVRSAGGIYLTLKNGEPTGFAPLRALDYGPRNLVFLGRLIRQLVTPVGGQLGVTQE
RMIDEGLASLGRLAPEDRSILALRQLLGQRDPEGIGARLEKWARGGSLGWVFDNEIDALS
LEAPFVGFDMTDFLDNPEVRTPLMMYMFHRIDGLLDGRRLVIDIDEFWKALGDDAFRAFA
QDGLKTYRKQNAFLVFGTQSPADALRSDISHSIMEQVATKILLPNPYGRETDYVDGLGLT
QAEFKLIRHDLNPESRRFLVKQGHDSIVVELDLGGLSDELAVLSGTTETVTLLDAIRAEV
GDDPENWLPVFHRQRRSPSSRKG
NT seq 2412 nt   +upstreamnt  +downstreamnt
gtggctagcgccgccgcccagctgccgccgcgcaagacgccctggcgggttctggcccga
gaagcggagcccgggcgctatcttccctatgcccgccatgtgacgcccgatgtgattgcg
ctcgatagcggcgatctcatgatgatgttccgtctcgaagggctggctttcgagacggct
gatccgatccacctcaatgattggcacgagaagctcaacggcacctggcgcaacatcgcc
gacgatcggcttgcgatctggacccacatcgtccgctcagccgtaggggactatcccgaa
ggacagttccgctcaaagttcgccgccgagctcgacggtaaatatcgggcgcgcgtcacc
gccaagcggatgttcgtcaatgagcattatctgacgctgctcatgcgtccggccgtcgga
tcggccgaccggaccgggctgctgctcaagcggatcgcgaaagccaaggccgcggaggag
gaagtcgatcccgacgaactggcgcgcttcgaggagaaggcgcgcgacatcgagaagctg
ctccgccgctgcagcccggcgcgcctcgccctctacgagcataatggcctgatcttctcc
gccccgcttgaggtgctcgagcaagtgatgatgggggcgcgatccagggttccgctcgtc
cgcggtcatctgggatcggcgctttacggtgagcgtgtgattttcggacgcgagacggtc
gagatccgcgctcatgacgcgagccgctggcaggggatcttcggcatcagggaatatccc
gcgctgacgcgcccgggacagatgaatgccttgctcggccaggatttcgcctttgtcgtc
tcgcaatccttcaccttcatgggtaaggcgcgggcagccgaacggctgcgccgccggcaa
aaccagatggcctcgaccgaggatgccgcagcgagccaggcgctcgatctcgccgatgcc
gccgacgatctgcaaagcaaccggttcgtgctcggggagcatcatttctcgttggcggtc
ttcgccgacagccaaaggcgacttgccgacaatctctcggccgcgcgtgcggcgctggcc
gatgctggtttggtggcggcgcgcgaaggaccagcgctcgaagcagcgttctgggcgcag
ctgcccggaaatttcgcatggcgggcgcggccggcggcgatcacctcgcgcaattttgct
gccttggcgccgttccatacctatcccgcaggccggcccaaggggaaccattgggggcct
gcgatcgccatgatgaagacggccgcgcaatcgccctattatttcaacttccatgtcggc
gatttgggtcacacactgattatcggtccttccggcgcgggcaagaccgtcgtccagaat
tttctgatggcgcagctcgagaaaacgggcgcgcagcagatcttcatcgacaaggaccgt
ggcgcggagatttatgtccggtctgcgggcgggatctatctgacgttgaagaatggggag
cctacaggtttcgcgcccctgcgggcactcgactatggtccgcgcaatcttgtctttctg
gggcgcttgatccgccaactggtgacgccggtcggaggccagctcggcgtcacacaggag
cgtatgatcgacgaggggctggcctcgcttggacgcctcgcgccggaggaccggtccatt
ctcgcgctgcgccagctgctcggtcagcgcgacccggaaggcattggtgcccggctggag
aaatgggcgcggggcggttcgctcggctgggtgttcgacaatgagatcgacgctttgtcg
ctggaggcgccgttcgtcggtttcgacatgaccgattttctcgacaaccccgaagttcgc
acgccgctcatgatgtacatgttccaccggatcgacggtctcctcgacggccggcggctt
gtgatcgacatcgacgaattctggaaagccttgggggacgatgcgttccgcgccttcgcg
caggacggcctcaagacctaccgcaagcagaatgcctttcttgtcttcggcacgcaaagc
cctgcggatgcgctgcgttcggacatttcgcacagcatcatggagcaggttgcgaccaag
atactgcttcccaacccctacggccgcgaaacggactatgtcgatggactgggtctgacc
caggcggaattcaagctcatccgccacgatctgaatccggaatcccgccggtttctggtc
aagcaaggccatgactcaatcgtcgtcgagctcgatcttggcggtctctccgacgagctg
gcagttctctcgggcaccacggaaacggtgacgctgctcgatgccatccgcgccgaggtc
ggcgacgatcccgaaaactggctgcctgtctttcaccggcagcgtcggtctccatcgagc
aggaaaggatga

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