KEGG   Sphingobium indicum B90A: SIDU_12090
Entry
SIDU_12090        CDS       T04604                                 
Name
(GenBank) transporter
  KO
K03199  type IV secretion system protein VirB4 [EC:7.4.2.8]
Organism
sinb  Sphingobium indicum B90A
Pathway
sinb03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sinb00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    SIDU_12090
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sinb02044]
    SIDU_12090
Enzymes [BR:sinb01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     SIDU_12090
Secretion system [BR:sinb02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   SIDU_12090
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG AAA_10 AAA_22 FtsK_SpoIIIE AAA_7 nSTAND3 ABC_tran TrwB_AAD_bind ATPase AAA_29 AAA_16
Other DBs
NCBI-ProteinID: APL95188
UniProt: A0A1L5BQU8
LinkDB
Position
complement(2552095..2554512)
AA seq 805 aa
MRVASAAAQLPPRKTPWRILRQEAEPGRYLPYVRHVTSEVIALDSGDLMMMFRLEGLAFE
TADPIHLNDWHEKLNGTWRNIADDRLALWTHIVRRPVDDYPEGQFRSDFAADLDEKYRAR
VTAKRMFVNEHYLTLIMRPAVGSADRTGLLLKRIAKARAADEEVDPDELARFEEKARDIE
KLLRRCSPARLALYEQNGLLFSRPLEVLEQVMMGAKAKVPLVRGHLGSALYGERVIFGRE
TVEIRAHDASRWLGIFGIREYPALTRPGQMNALLGQDFAFVVSQSFTFMGKARAAERLRR
RQNQMASTEDAAASQALDLEDAADDLQSNRFVLGEHHFSLGVFAESQRRLADNLSAARAA
LADAGLVSAREGPALEAAFWAQLPGNFAWRARPAAITSRNFAALAPFHTYPAGRPSGNHW
GPAIALMKTAAQSPYYFNFHVGDLGHTLIIGPSGAGKTVVQNFLMAQLEKTGAQQIFIDK
DRGAEIYVRSAGGIYLTLKNGEPTGFAPLRALEYGPRNLVFLGRLIRQLVTPPGGTLGVT
QERMIDEGLASLGRLAPENRSILALRQLLGQRDPEGIGARLEKWSRGGSLGWVFDNEIDA
LSLDAPFLGFDMTDFLDNPEVRTPIMMYMFHRIDGLLDGRRLVIDIDEFWKALGDDAFRA
FAQDGLKTYRKQNAFLVFGTQSPADALRSDISHSIMEQVATKILLPNPYGRETDYIDGLG
LTQAEFKLVRHDLNPESRRFLIKQGHDSIVVELDLGGLSDELAVLSGTTETVTLLDAIRA
DVGDDPAKWLALFHQQRRSASIRKG
NT seq 2418 nt   +upstreamnt  +downstreamnt
ttgcgcgtggctagcgcggctgcccagcttccgccgcgcaagacgccgtggcgcatattg
cggcaagaggccgagccgggtcgctatctgccctacgtgcgccacgtgacatcggaggtg
atcgcgctcgatagcggcgacctcatgatgatgttccgccttgaagggcttgcgttcgag
accgcggatccgatccacctcaatgactggcacgagaagctcaacggcacctggcgcaac
attgccgacgatcggctcgcgctctggacgcacatcgttcgccgcccggtcgatgactat
cccgaaggccaattccgctcggacttcgcggccgatctggacgaaaaatatcgcgcgcgg
gtgactgccaagcgcatgttcgtcaacgagcattatctgacgctgatcatgcggccggcg
gtcggctcggccgatcggaccgggcttctcctcaagcgcatcgccaaggccagggcggcc
gatgaggaagtcgaccccgacgagttggcccgcttcgaggagaaggcgcgcgatatcgaa
aagctgcttcggcggtgcagccccgcgcggctcgctctttatgagcagaatggcctccta
ttctccaggccgctcgaagtgctcgagcaagtcatgatgggcgcaaaggccaaggtcccg
ctggtccgaggccatcttggatcagccctctacggcgagcgggtgatcttcggacgcgag
acggtcgagatccgcgcccatgatgcgagccgctggttgggcattttcggcatccgggaa
tatcccgcgctcacccgtcccggtcagatgaacgctctgctcggccaggatttcgcgttc
gtcgtctcgcagtccttcaccttcatggggaaggcgcgcgcagccgaaaggctgcgccgg
cgacagaaccagatggcttcgaccgaggacgcggcagcaagccaggcgctcgacctcgaa
gacgccgccgacgatcttcaaagcaatcggttcgtccttggcgaacatcatttctcgctt
ggggtgtttgccgaaagccagaggcgactcgccgataatctgtcggccgcgcgggcggcg
ctcgcggacgctggtttggtatcagcgagggaagggccggcgctcgaagcagccttctgg
gctcagcttcccggtaacttcgcgtggcgggcgcggccggcggcaatcacatcgcggaat
ttcgccgcattggcaccttttcatacctaccccgcaggccggccgagcggaaatcattgg
ggtccggcgatcgcgctgatgaaaacggccgcgcaatcgccctactatttcaacttccat
gtcggggatctcggccacacgctcatcatcggtccctcgggcgcgggcaaaacggtcgtt
cagaacttcctgatggcgcagctcgagaagacgggcgcgcagcagatcttcatcgacaag
gatcgcggcgccgagatctacgtgcggtctgctggcgggatctatctgacgctgaagaac
ggggagccaaccggcttcgcgccgctgcgggcgctcgaatatgggccgcgcaacctcgtc
tttctcggtcgtctgatccggcagctggtgacgccgcccggcggcacgctgggcgtcacc
caggagcgcatgatcgacgaaggcttggcgtcgctcgggcggctcgcaccggagaaccga
tccattctggccctgcgccagctgctcggccagcgcgatccggaaggcatcggcgctcgg
cttgagaaatggtcgcgaggcggatcgctgggttgggtgttcgacaacgagatcgatgct
ttgtcgctcgatgcgccgttcctcggcttcgacatgaccgacttcctcgacaatccggaa
gttcgcacgccgatcatgatgtacatgttccatcgcatcgacggccttctggatggccga
cgactggtgatcgacatcgatgagttctggaaggcgctgggtgatgacgctttccgcgcc
tttgcccaggatggcctgaagacctaccgcaagcagaacgccttcctggttttcggcacg
cagagcccggccgatgcgctgcgctcggatatctcgcacagtatcatggagcaggtcgcg
accaagatcctgctgcccaacccctatgggcgtgaaacggattatatcgacgggctgggc
ctgacccaggcggaattcaagctcgtccgtcacgacctgaacccggaatctcgccgcttc
ctcatcaagcagggtcatgactcgatcgtggtggaactggacctgggcggcctctccgac
gagctcgcggtgctctcgggcaccacggaaaccgtgacgctcctcgatgccattcgcgct
gatgtcggcgacgacccggcgaaatggttggctctttttcaccagcagcgtcggtctgca
tcgatcaggaaaggatga

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