Sphingobium indicum B90A: SIDU_12220
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Entry
SIDU_12220 CDS
T04604
Name
(GenBank) PAS domain-containing sensor histidine kinase
KO
K14986
two-component system, LuxR family, sensor kinase FixL [EC:
2.7.13.3
]
Organism
sinb
Sphingobium indicum B90A
Pathway
sinb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sinb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SIDU_12220
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sinb01001
]
SIDU_12220
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sinb02022
]
SIDU_12220
Enzymes [BR:
sinb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
SIDU_12220
Protein kinases [BR:
sinb01001
]
Histidine kinases
LuxR family [OT]
SIDU_12220
Two-component system [BR:
sinb02022
]
LuxR family
FixL-FixJ (nitrogen fixation)
SIDU_12220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
PAS
PAS_9
PAS_4
HisKA
PAS_8
Diguanyl_cycl_sensor
HATPase_c_5
PAS_3
HATPase_c_2
PAS_10
Motif
Other DBs
NCBI-ProteinID:
APL95214
UniProt:
A0A1L5BQM9
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All DBs
Position
2576247..2577782
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AA seq
511 aa
AA seq
DB search
MVYTRRGPDEIAREVARLAPLFLRQAGGHVLTLLDPSGMVLSYNEEGERAECWPLDRVLG
QPHDLFYPPDEIAAGRPGADLAAALHEGTLEREAWRVCENGAEYLARLTITALFEGDTHR
GFACISRDVTDEAAVRASIETREQHLQSILATVPDAMIIIDETGAITSFSAAAQRLFGYS
EAELVGRNVSCLMPQPDRDRHDEYLAHYLQTGERRIIGLGRVVVGQRRDGSTFPMQLSVG
EAGEDGQRLFTGFIRDLTAKEQDELRLKELQAELVHVSRLSAMGTMASTLAHELNQPLAA
VALYLETIRDMLDERDDEPFVSLRSVMDDAAQETLRAGHIVRRLRDFVARGEVDKSLHEL
PQVIAEASQLALVGARERGIRSFFAVDPAATLVLVDRVQIQQVLVNLMRNAIEAMAECPV
RDLKVATRLRPDGLIEVTVEDTGPGIADGIREQLFTAFNSTKADGMGLGLSICRTIIEAH
GGRIWMERPDRGGTRFHFTLIHARAEEEHGG
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggtctacacgaggcgcgggcccgacgagattgccagggaggtggcgcggcttgcgccg
ctgttcctgcgacaggctggcggccacgtcctgacgctgctcgatccttccgggatggtg
ctgagctataatgaagaaggcgagcgtgccgaatgctggccgctcgatcgcgtcctggga
cagccccacgacctgttctacccgcccgacgagattgcggcggggcgtccaggcgcagac
ctggcggccgcccttcacgagggcacgctggagcgcgaagcgtggcgggtctgcgagaac
ggcgcggaatatctggcgcgcctgacgatcaccgcactgttcgaaggcgacacacatcgc
ggcttcgcctgcatcagccgcgatgtcaccgacgaggcggcggtccgcgcatcgatcgag
acccgcgagcagcatctgcaatcgattctggcgacggtgccggatgcgatgatcatcatc
gacgagaccggcgccatcacgtcgttcagcgcagcggcacaacgcctgttcggctacagc
gaagccgagctcgtcggccgcaacgtctcctgccttatgccccagcccgatcgcgaccgt
cacgacgaatatctcgcgcattatctgcagaccggcgagcgccggatcatcggcctcggt
cgcgtcgtggtcggccagcgccgcgacggctcaaccttcccgatgcagctgtcggtcggc
gaggccggtgaagacgggcagcggttgttcaccggctttatccgggatctcaccgccaag
gagcaggatgagctcaggctcaaggaactgcaggcagagctggtccatgtctctcggctg
agcgcgatgggcacgatggcctcgacgctcgcgcatgagctcaaccagccgcttgccgcg
gtcgcgctctatctcgagacgatccgcgacatgctcgacgagcgggacgacgaacccttc
gtgtcgctacggtcggtgatggatgatgcggcacaggaaacgctgcgggccggccatatc
gtccggcgcctgcgcgatttcgtcgcccgcggcgaggtcgacaagagcctccacgagctg
ccgcaggtcatcgccgaggcgagccagctcgcgctggtcggtgcacgcgagcgcggcatc
cgcagcttctttgcggtcgatcccgccgcgacgctggtcctcgtcgacagggtgcagatc
cagcaggtgctggtcaacctgatgcgcaatgccatcgaggcgatggcggagtgtccggtt
cgcgacctcaaggtggcgaccaggttgcgccctgacgggctgatcgaggtgaccgtggag
gataccggtcccggcatcgcggacggaatccgcgagcagctcttcacggcgttcaactcg
acaaaggccgacggcatgggcctcggcctctcgatctgccggaccatcatcgaagcgcat
ggcggccgtatctggatggagcgccccgaccgcggcggcacccgctttcattttaccttg
atccatgcgcgggcggaggaggaacatgggggatag
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