Sphingobium indicum B90A: SIDU_12885
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Entry
SIDU_12885 CDS
T04604
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sinb
Sphingobium indicum B90A
Pathway
sinb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sinb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SIDU_12885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sinb03400
]
SIDU_12885
Enzymes [BR:
sinb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SIDU_12885
DNA repair and recombination proteins [BR:
sinb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SIDU_12885
Prokaryotic type
SIDU_12885
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
APL95336
LinkDB
All DBs
Position
2702993..2703688
Genome browser
AA seq
231 aa
AA seq
DB search
MSDTIRLDESWRAPLLGEFESPYMQGLKRFLEEEKRQGKRIFPKGSEYFRALDLTPLDKV
KVVVLGQDPYHGEGQAHGLCFSVKPGVRTPPSLVNIYKELQSDLGLRPPRHGFLEHWARQ
GVLLLNSVLTVEMGKAASHQKRGWEQFTDAIIRLVNQKNEPVVFLLWGSYAQRKAEFVDR
TRHLVLKAAHPSPLSAHNGFLGCRHFSQANAFLEEKGRGAIDWGLPETVAA
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaccatcaggctggacgagagctggcgcgccccgctgctcggcgaattcgaa
agcccctatatgcaggggctgaagcgctttcttgaggaggagaagcgtcagggcaagcgc
atcttccccaagggcagcgaatatttccgggcgctggacctgacgccgctggacaaggtg
aaggtggtggtgctggggcaggatccctatcatggcgaggggcaggcgcatgggctgtgc
ttcagcgtaaagccgggcgtgcggacgccgccgtcgctggtcaatatctacaaggaattg
cagagcgacctgggcctgcggccgccgcgtcacggtttcctggaacattgggcgcggcag
ggcgtgctgctgctgaacagcgtgctgacggtggagatgggcaaggccgcgtcgcaccag
aagcgcggctgggagcagttcaccgacgccatcatccggctggtcaatcagaagaacgag
ccggtcgtgttcctgctgtggggcagctatgcgcagcgcaaggcggagtttgtggaccgc
acgcggcatctggtgcttaaggcggcgcacccctcccccctttcggcgcataacggcttt
ctggggtgcaggcatttttcgcaggccaacgcctttctggaggagaaggggcgcggggcg
atcgactggggcttgccggaaacggtggcggcatga
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