KEGG   Sphingobium indicum B90A: SIDU_13295
Entry
SIDU_13295        CDS       T04604                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
sinb  Sphingobium indicum B90A
Pathway
sinb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sinb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SIDU_13295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sinb03400]
    SIDU_13295
DNA repair and recombination proteins [BR:sinb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SIDU_13295
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      SIDU_13295
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 Kinesin AAA_16 Microtub_bd UB2H SWI2_SNF2 DUF87 FATC Peripla_BP_6 AAA_22 AAA_7
Other DBs
NCBI-ProteinID: APL95411
UniProt: A0A1L5BR91
LinkDB
Position
2787339..2789522
AA seq 727 aa
MSIQIRTTLDEPETGEGFVPHRPARPEKSEGGRPFKLVSDYEPSGDQPTAIAELVETALQ
GEKDQVLLGVTGSGKTFTMAKVIEALQRPALVLAPNKILAAQLYGEFRSFFPENAVEYFV
SYYDYYQPEAYVPRSDTYIEKESSVNEAIDRMRHSATRALLERDDVLIVASVSCLYGIGS
VETYSAMTFAMKKGQVEDQREIIRKLVALQYKRNDAAFARGNFRVKGDNLEIFPSHYEDT
AWRVSFFGNEIEDIVEFDPLTGKKVASLDYVKVFPNSHHVTPGPTLKQAMEAIRFELAER
LKELTAEGKLLEAQRLEQRTNFDLEMIAATGSCAGIENYSRFLTGRLPGEPPPTLFEYLP
ENALLFVDESHQTVPQIGAMARGDHRRKITLAEYGFRLPSCIDNRPLRFNEWDAMRPQTV
SVSATPGPWEMEQTGGAFSEQVIRPTGLIDPPVEIKPVEDQVDDLIHEAKETAKKGYRTL
VTTLTKRMAEDLTEFMHEAGIKVRYMHSDVETLERIELIRDLRLGVYDVLVGINLLREGL
DIPECGLVAILDADKEGFLRSETSLIQTIGRAARNVDGRVILYADRITGSMERALNETSR
RREKQMAYNLEHGITPTTIKRNIGDIIAHVASKDQVTVDTGLEDRPHLVGHNLRAYIEDL
EKKMRAAAADLEFEEAGRIRDEIRKLEAEELGLPAEQQVAAPRGRAMEGKPGTRKLRYGK
VQKKFGR
NT seq 2184 nt   +upstreamnt  +downstreamnt
atgtctatccagatccgcaccacgctggacgagccggagaccggcgaaggcttcgtcccc
caccgccccgcacgcccggaaaagagcgagggcggcaggccgttcaagctggtttccgac
tatgaaccgtcgggggaccagccgaccgccatcgccgaactggtggaaacggcgctccag
ggcgagaaggaccaggtgctgctgggcgtcaccggatcgggcaagaccttcaccatggcg
aaggtgatcgaggcgttgcagcggcccgcgctggtgctggcgcccaacaagatcctggcc
gcgcagctttacggggagttcaggagcttcttccccgaaaacgccgtcgaatatttcgtc
agctattacgactattatcagcccgaagcctatgtgccgcggtcggacacctatatcgaa
aaggagtccagcgtgaacgaggcgatcgaccggatgcgccattcggccacccgcgcgctg
ctggaacgcgacgatgtgctgatcgtggcctcggtttcctgcctctacggcatcggatcg
gtcgaaacctattcggcgatgaccttcgcgatgaagaagggccaggtggaggatcagcgg
gaaatcatccgcaagctggtggcgttgcagtacaagcgcaacgacgcggcctttgcgcgg
gggaatttccgggtgaagggggataatctggagattttcccgtcccactatgaggatacg
gcctggcgggtcagcttcttcggcaatgagatagaggacatcgtcgagttcgacccgctg
accggcaagaaggtggcgagcctcgactatgtgaaggtctttcccaattcgcaccacgtc
acgccggggccgacgctcaagcaggcgatggaggcgatccggttcgaactggccgagcgg
ctgaaggaactgaccgccgagggcaagctgctggaggcgcagcggctggagcagcggacc
aatttcgacctggagatgatcgcggcgaccggctcctgcgcggggatcgaaaattattcg
cgcttcctgaccggccgactgcccggcgagccgccgccgaccctgttcgaatatctgccc
gaaaacgcgctgctgttcgtcgacgagagccaccagaccgtgccgcagatcggggcgatg
gcgcggggcgaccaccggcgcaagatcacgctggccgaatatggattccgcctgccgagc
tgcatcgacaaccggccgctccgcttcaacgaatgggacgcgatgcggccgcagacggtc
agcgtctccgctacgcccggcccgtgggagatggagcagaccggcggcgccttctccgaa
caggtgatccgcccgaccgggcttatcgacccgccggtcgagatcaagccggtggaggat
caggtggacgacctgatccatgaggcgaaggagacggcgaagaagggctatcgcacgctg
gtgacgacgctcaccaagcggatggcggaggatctgaccgaattcatgcatgaggccggg
atcaaggtccgctacatgcacagcgatgtcgagacgctggagcggatcgagctgatccgc
gacctgcggctgggcgtctacgacgtgctggtgggcatcaacctgctgcgcgaggggctg
gacattcccgaatgcggactggtcgcgatcctggatgcggacaaggagggctttttgcgt
tccgaaacctcgctgatccagacgatcgggcgcgcggcgcgcaatgtcgacgggcgggtg
atcctctatgccgaccgtattaccgggtcgatggaacgggcgctcaacgaaacgtcgcgg
cggcgcgagaagcagatggcctataatctggagcatggcatcacgccgaccacgatcaag
cggaacatcggcgacatcatcgcccatgtcgcgtcgaaggatcaggtgacggtggatacg
gggctggaggaccggccgcacctcgtgggccacaatctgcgcgcctatatcgaggatctg
gaaaagaagatgcgcgccgccgcggccgatctggagttcgaggaagccgggcggatacgc
gacgagatccgcaagctggaggcggaggaactgggcttgcccgccgaacagcaggtggcg
gcgcccaggggccgggccatggaaggcaagccgggaacccgcaaattgcgctacgggaag
gtgcagaagaagtttggacgatag

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