Sphingobium indicum B90A: SIDU_13660
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Entry
SIDU_13660 CDS
T04604
Name
(GenBank) Holliday junction resolvase
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
sinb
Sphingobium indicum B90A
Pathway
sinb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sinb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SIDU_13660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sinb03400
]
SIDU_13660
Enzymes [BR:
sinb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
SIDU_13660
DNA repair and recombination proteins [BR:
sinb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SIDU_13660
RecFOR pathway proteins
SIDU_13660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
Motif
Other DBs
NCBI-ProteinID:
APL95473
UniProt:
A0A1L5BRG3
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All DBs
Position
2861609..2862100
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AA seq
163 aa
AA seq
DB search
MIILGLDPGLGTTGWGLIAADGNRLTHIANGQIKTDSDMALASRLLVLDLALTDLILEHQ
PNGAAVEEVFLNVNPQSTLKLGQARGVVLLAASRSGMEVGEYAARLVKKSVVGVGNASKE
QVHAMVSRLLPGAKVAGPDASDALAVAITHAHHLASARRIPRK
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcctgggcctggaccccggcctgggcacgaccggctggggcctgatcgccgcc
gacggcaaccggctgacccatatcgccaacggccagatcaagaccgattcggacatggcg
ctggcgagccggctgctggtgctcgatctggcgctgaccgacctcatcctcgaacatcag
cccaatggcgccgcggtcgaggaggtgttcctgaacgtgaatccgcaatcgacgctgaaa
ctcggccaggcgcgcggcgtggtgctgctggccgcgtcgcgctccggcatggaggtgggc
gaatatgccgcccggctggtcaagaaatccgtggtcggcgtcggcaatgcgtcgaaggag
caggtccacgccatggtctcccgccttctccccggcgcgaaggtcgctggacccgacgct
tcggatgcgctggccgtggcgatcacgcacgcccaccacctggccagcgcgaggcggatt
ccgcggaagtag
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