Sphingobium indicum B90A: SIDU_13980
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Entry
SIDU_13980 CDS
T04604
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sinb
Sphingobium indicum B90A
Pathway
sinb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sinb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SIDU_13980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sinb03021
]
SIDU_13980
03400 DNA repair and recombination proteins [BR:
sinb03400
]
SIDU_13980
Enzymes [BR:
sinb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SIDU_13980
Transcription machinery [BR:
sinb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SIDU_13980
DNA repair and recombination proteins [BR:
sinb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SIDU_13980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
TmoB
IDH
Motif
Other DBs
NCBI-ProteinID:
APL95530
UniProt:
A0A1L5BRM2
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All DBs
Position
2914711..2915775
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AA seq
354 aa
AA seq
DB search
MTVNMKNWQELKKPNSLEIKVAGDGRRKATFVAEPLERGFGLTLGNALRRVLLSSLQGAA
VTSIKIENVLHEFSSLAGVREDVTDIVLNIKQVALKMEGDGPRRLQLSATGPAEVRAGDI
TTVGDIEVMNPDLVICHLDQGATLNMELTADVGKGYVPAVANRPADAPIGLIPIDALYSP
VRQVAYKVDNTRVGQELDYDKLSLTVETDGTVTPEDAVAYAARILQDQLQLFVHFEDALP
AAAPAAGAAAGGSASEGESDANQINRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKT
EAEMLRTPNFGRKSLNEIKEVLSSMGLRLGMDIPGWPPENIEEMAKKLEQELLG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcaacatgaagaactggcaggaattgaagaagcccaacagccttgaaatcaag
gtcgcgggcgacggcaggcgcaaggcgaccttcgtcgccgaacctctggagcgcggcttc
ggcctgacgctcggcaatgcgctgcgccgggttcttctgtcctcgctccagggcgcggcg
gtcacctcgatcaagatcgagaacgtcctccacgaattctcctcgctcgcgggggtgcgt
gaggacgtcacggacatcgtcctcaacatcaagcaggtcgcgctcaagatggaaggcgac
ggtcctcgccgtctccagctttccgccaccggccccgcagaggtgcgcgcgggcgacatc
accacggtgggcgacatcgaagtgatgaaccccgacctggtgatctgccacctggaccag
ggcgcgacgctgaacatggaactgaccgccgacgtcggcaagggctatgtccccgccgtc
gccaaccgtccggcggacgccccgatcggcctgatcccgatcgacgcgctctactcgccg
gtccgtcaggtcgcctacaaggtcgacaatacccgcgtcggccaggaactggactatgac
aagctgtcgctgaccgtcgagaccgacggcaccgtcacgccggaagatgcggtggcctat
gccgcccgcatcctgcaggaccagcttcagttgttcgtccacttcgaggacgcgctgccc
gccgccgctccggctgccggcgccgccgccggcggttcggccagcgagggcgagagcgac
gcgaaccagatcaaccgctatctgctcaagaaggtggacgagctggaactgtcggtccgt
tcggcgaactgcctcaagaacgacaacatcatctatatcggcgacctggtccagaagacc
gaggccgagatgctgcgcaccccgaatttcggccgcaagtcgctgaacgaaatcaaggaa
gtgctgtcgtccatgggcctgcgcctgggcatggacatccccggctggccgccggagaat
atcgaggaaatggccaagaagctcgaacaggagctgctgggctga
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