KEGG   Sphingobium indicum B90A: SIDU_14385
Entry
SIDU_14385        CDS       T04604                                 
Name
(GenBank) conjugal transfer protein TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
sinb  Sphingobium indicum B90A
Pathway
sinb02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sinb00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SIDU_14385
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sinb02044]
    SIDU_14385
Enzymes [BR:sinb01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     SIDU_14385
Secretion system [BR:sinb02044]
 Type IV secretion system
  Trb secretion system protein
   SIDU_14385
SSDB
Motif
Pfam: T2SSE Zeta_toxin DEAD FtsK_SpoIIIE AAA_28 AAA_16 nSTAND3 Dynamin_N GTP_EFTU AAA_29 Mg_chelatase AAA_7 TrwB_AAD_bind AAA_19 AAA_22 AAA_18 DUF4093
Other DBs
NCBI-ProteinID: APL96392
UniProt: A0A1L5BU94
LinkDB
Position
3020914..3021864
AA seq 316 aa
MLITALGTDIAAAMRDPLVIEIMVNPDGALRLDRLGEGRTDTEVRMEPDQVERIIRLVAS
HARAEVHAEHPIISAELPPHIEGRAGERFEGVLPPVSSAPCFSIRKPAQKLHTLDDYIAD
GLMSAPQADALRAAVTQRYNILVAGGTSSGKTTLANALLAEMAWVDSRVILIEDTRELQC
PLPDTVALRTRPPHVTMTELVRSTMRLRPDRIVVGEVRGPEALDMLKAWNTGHPGGIATV
HANSGQAALYRIEQLVQEAVVTVPRQLIAEAIDIVVFISGRGTDRRVSTIARVAGLDPDT
GTYALADLPKLNTKET
NT seq 951 nt   +upstreamnt  +downstreamnt
atgctgatcacggcgctcggcaccgacatcgccgccgcgatgcgcgacccgctggtcatc
gagatcatggtcaatcccgacggggcgctcaggctcgaccggctcggcgaaggtcgcacc
gacaccgaggtccggatggaacccgatcaggtcgagcgcatcattcggctggtcgccagc
cacgcgcgcgccgaggtccatgccgagcatccgatcatctcggcggaactgcccccgcat
atcgaaggccgggccggcgaacggttcgaaggcgtgctgcccccggtctcgtcggcgccg
tgcttctcgatccgcaagcccgcgcagaagctccacacgctcgacgattatatcgcagat
gggttgatgtcggcgccgcaggccgacgcgctgcgcgctgcggtcacccagcgctacaat
atcctcgtcgccggcggcaccagctcgggcaagacgacgctcgccaatgcgctgctcgcc
gagatggcgtgggtcgatagccgcgttatcctgatcgaggacacgcgtgagttgcaatgc
ccgctgcccgacacggtagcgctgcgcacgcgccccccgcatgtgacgatgacagagctg
gtgcgatcaaccatgcgcctgcgccccgatcgcatcgtcgtcggagaggtccgcggcccc
gaagcactcgacatgctcaaggcatggaacaccggccatcccggcgggatcgcgacggtc
catgccaacagcggacaagccgcgctctaccggatcgaacagctggtgcaggaggcggtg
gtcaccgtgccgcgccagctgatcgccgaggccatcgacatcgtcgtcttcatctcgggg
cgcggcaccgaccgccgcgtctcgaccatcgcgcgcgtcgccgggctcgatcccgacacc
ggcacctacgcgctcgccgatcttcccaagctcaacaccaaggagacctga

DBGET integrated database retrieval system