Sphingobium indicum B90A: SIDU_14485
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Entry
SIDU_14485 CDS
T04604
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sinb
Sphingobium indicum B90A
Pathway
sinb00061
Fatty acid biosynthesis
sinb00071
Fatty acid degradation
sinb01100
Metabolic pathways
sinb01212
Fatty acid metabolism
sinb02024
Quorum sensing
sinb04146
Peroxisome
Module
sinb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sinb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SIDU_14485
00071 Fatty acid degradation
SIDU_14485
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SIDU_14485
09145 Cellular community - prokaryotes
02024 Quorum sensing
SIDU_14485
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sinb01004
]
SIDU_14485
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sinb04147
]
SIDU_14485
Enzymes [BR:
sinb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SIDU_14485
Lipid biosynthesis proteins [BR:
sinb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SIDU_14485
Exosome [BR:
sinb04147
]
Exosomal proteins
Exosomal proteins of breast milk
SIDU_14485
Exosomal proteins of breast cancer cells
SIDU_14485
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
APL96394
UniProt:
A0A1L5BU59
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All DBs
Position
complement(3036546..3038288)
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AA seq
580 aa
AA seq
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MFFDRARAMGDAPFLWRKAAGEWQSLSWTEVALEVASLASALQAQGLKPGDPVMLVSENR
PEFCIADLAIMAAGCVTVPTYTTNTTRDHQHILTDSGARAVIVSTAKLAQNLMPAVLRSQ
ASFVIGMEPLRGMQGDVACHLWSDLIAHYPTDIEACAASQAAKRDDLACIIYTSGTGGAP
RGVMQHHGAILCNIEGADKLLEEDFGRGQEVFLSFLPLSHAYEHSGGQFLPIMVAGQIYY
SEGLEKLASNIEEARPTIMVVVPRLFEVLRARIIKSIEKQGKFPAYLLGQALRIAAKEQR
GRKSLLDLPMKALLARTLKPKIAARFGGRMKALVSGGAPLNPDVGLFFDAMGLTLLQGYG
QTEAGPVISCNRPRAGIAMDTVGPPLDGVEVRIADDGEILVRGELVMHGYWRNAAETERA
LQNGWLHTGDIGEIDEKGRIRITDRKKDLIVNDKGDNVSPQKVEGMLTLQPEIGQAMVHG
DRRPHLVGLLVPDAEWTREWAAEQGRKVEGIEKDAAYQAALRAAVDRVNDDLSVIERVRR
FILADEPFTIENSEMTPSMKIRRHVIRARYQDRLDALYKG
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcgaccgcgccagggcgatgggcgacgcccccttcctgtggcgcaaggcggcg
ggggaatggcaatcgctcagctggaccgaagtcgctctggaggtcgcctcgctggccagc
gcattgcaggcgcagggattgaagccgggcgatccggtgatgctggtcagcgagaaccgg
ccggaattctgcatcgcggaccttgccatcatggcggcgggctgcgtcacggtgccgacc
tacaccaccaacaccacccgcgaccaccagcatatcctgaccgacagcggcgcccgcgcc
gtcatcgtttccaccgcgaagctggcgcagaacctgatgcccgccgtgctgcggtcgcag
gccagcttcgtcatcggcatggagccgttgcgcggcatgcagggcgatgtcgcctgccat
ctatggagcgacctgatcgcccattatcccaccgacatcgaggcctgcgccgccagccag
gcggcgaagcgcgacgatctggcctgcatcatctacaccagcggcaccggcggcgcgccg
cgcggggtgatgcagcatcacggcgccatcctctgcaatatcgagggggccgacaagttg
ctggaggaggatttcgggcgggggcaggaggtgttcctgtccttcctgcccctgtcccac
gcctatgagcatagcgggggccagttcctgccgatcatggtggcgggtcagatctattat
tccgaagggctggaaaagctggccagcaatatcgaggaagcgcggccgacgatcatggtc
gtcgtcccccgcctgttcgaggtgctgcgcgcccgcatcatcaagtcgatcgagaagcag
ggcaaattccccgcctatctgctgggccaggcgctgcgcatcgcggcgaaggagcaacgc
gggcggaaatcgctgctcgacctgccgatgaaggcgctgctggcgcgcaccctgaagccc
aagatcgcggcccggttcggcgggcggatgaaggcgctggtgtcgggcggcgcgccgctc
aatcccgatgtcggcctgttcttcgacgccatggggctgacgctgctccagggctatggc
cagaccgaggcggggccggtgatcagttgcaaccgcccccgcgccgggatcgcgatggac
acggtggggccgccgctggacggggtggaggtgcggatcgcggacgacggcgaaatcctc
gtccgcggggaactggtgatgcacggctattggcgcaatgcggcggaaacggaaagggcg
ctgcaaaatggctggctgcacaccggcgacatcggggagatcgacgaaaagggccgcatc
cgcatcaccgaccgcaagaaggatctgatcgtcaacgacaagggcgacaatgtctcgccc
cagaaggtggaaggcatgctgacgctccagccggagatcgggcaggcgatggtccatggc
gaccggcggccgcatctggtggggctgctggtgcccgacgccgaatggacgcgcgaatgg
gcggcggagcagggacgcaaggtggagggcatcgagaaggatgccgcctatcaggctgcg
ctgcgcgccgcggtcgaccgggtgaatgacgatctgtcggtgatagagcgggtgcggcgc
ttcatcctggccgacgaacccttcaccatagagaatagcgagatgacgccgtcgatgaaa
atccgccgccacgtcatccgcgcccgctatcaggatcggctggacgcgctgtacaagggg
tga
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