Sphingobium indicum B90A: SIDU_15880
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Entry
SIDU_15880 CDS
T04604
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
sinb
Sphingobium indicum B90A
Pathway
sinb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sinb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SIDU_15880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sinb03400
]
SIDU_15880
DNA repair and recombination proteins [BR:
sinb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
SIDU_15880
SSDB
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Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
MutS_C
Motif
Other DBs
NCBI-ProteinID:
APL95866
UniProt:
A0A1L5BSK9
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Position
complement(3336271..3338922)
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AA seq
883 aa
AA seq
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MARTIDTSTQQATPMMAQYLALKAEAQDCLLFYRMGDFFELFFEDAKAAAATLDIALTSR
GEHGGAPIPMCGVPVHSAESYLARLIKAGHRVAIAEQTETPAEAKARGSKSLVARAIVRY
VTAGTLTEETLLDSRRDNMLAALAQVGGEEADEYGLAAADISTGRFETLTLRAADLPAEL
ARLRPSEIVLPDGLDLELPDSHPFDRAAFSSSRAETALKRIFGVATLDGFGQFSRAELAA
MGGLLGYLDHAGKGTLPFLAPPVRKTSGAHVAIDAATRESLEITTTMSGTRAGSLLGAVD
RTVTGAGARLLAQDLSAPLMDQPAIEARLGLVQLFHDDAMLRDQLRVALRALPDIGRALG
RLAMGRGSPRDLGQLRDGLGEARLLRERLGRLPDQPLLLAQLLPSLDGHGALVDSLSRAL
VPSPPTETANGGYIADGYDAALDELRRLAGDGRRAIAALEAKYREQTGIASLKIRHNGVL
GYHVEVPARAADQLMQPDSGFTHRQTLAGVVRFNSVDLHEQASRVAQAGAHALVAEAAHL
EELIESTLARKAEIARAADALARLDVAAALAERAAEGGWQRPHFLPEDGEGPCLEISGGR
HPVVEDALRRDGQPFVANDCRLGASDRLWLVTGPNMGGKSTFLRQNAIIVILAQAGAYVP
AQSATLTLVDRLFSRVGASDNLAKGRSTFMVEMVETAAILAQATERSFVILDEVGRGTST
YDGLALAWAVVEAVHEVNRCRCLFATHYHELTRLAETLSSLSLHHVRAREWKGDLVLLHE
VAEGPADRSYGLAVARLAGLPPAVLKRAKDVLSRLEAGKAKTGGIAAGLDDLPLFAAAVA
QVEEKADPLRAALDGIDADALSPREALDQLYRLKQLAAAGRDG
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgaacgatcgatacatccacgcaacaggcgacgcccatgatggcgcaatatctc
gcgctgaaggcggaggcgcaggactgcctgctcttctaccgcatgggcgatttcttcgaa
ctgttcttcgaggatgcgaaggcggcggcggcgacgctggacatcgcgctcaccagccgg
ggcgagcatggcggcgcgccgatcccgatgtgcggcgtgccggtgcacagcgcggaatcc
tatctggcgcggctgatcaaggcgggccatcgcgtcgccatcgccgaacagaccgaaacc
cctgccgaggccaaggcgcgcgggtccaagtccctcgtcgcccgcgccatcgtccgttac
gtgacggcaggcacgctgaccgaggaaacgctgctcgacagccggcgcgacaatatgctg
gcggcgctggcgcaggtcggcggcgaagaggcggacgaatatgggctggccgccgcagac
atttcgaccggccgtttcgagacgctgacgctgcgggcggccgatctgcccgccgaactg
gcgcgcctgcggccaagcgagatcgtgctgccggacgggttggacctggaactgcccgat
tcccacccgttcgaccgcgccgccttttccagcagccgggccgaaacggcactgaaacgc
atcttcggcgtcgccacgctggacggattcggccagttcagccgcgccgaactagcggcc
atggggggactgctcggctatctcgaccatgcgggcaagggcaccctgcccttcctggcc
ccgcctgttcgcaagaccagcggcgcgcatgtcgccatcgacgccgcgacccgcgagagc
ctggaaatcaccaccaccatgagcgggacgcgggcgggcagcctgctgggcgcggtggac
cggaccgtcaccggcgcgggcgcccgattgctggcgcaggatctgtcggcgccgctgatg
gatcagcccgcgatcgaggcgcggctgggactggtgcaacttttccatgacgacgccatg
ctgcgcgaccagttgcgcgtggcgctgcgagccttgccggacatagggcgcgccctgggg
cgtctggcgatgggccggggcagtccccgcgatctgggtcaactccgcgacgggctgggc
gaagcgcggctattgcgggagcggctgggccgcctgccagaccagcccctgctgctggcg
cagcttcttccctccctcgacggccatggcgcgctggtcgacagcctgtcccgcgccctc
gtccccagcccgcccaccgaaacggccaatggcggctatatcgccgacggctatgacgcg
gcgctggacgaattgcgtcgcctcgccggggacggccgccgcgccatcgccgcgctggag
gcgaaatatcgcgagcagaccggcatcgcctcgctcaaaatccggcataatggcgtgctc
ggctatcatgtcgaggtgcccgcccgcgccgccgaccagttgatgcagcccgacagcggc
ttcacccatcgccagacgctggcgggcgtggtgcgcttcaattcggtggacctgcacgaa
caggcgagccgcgtcgcgcaggccggtgcccacgcgttggtcgccgaagccgcgcatctg
gaagagctgatcgaatccaccctcgcccgcaaggcggagatcgcccgcgccgccgacgcc
ctcgcccggctcgacgtggcggctgcgctggccgaacgggcggccgaaggcggctggcag
cggccccatttcctgcccgaagacggcgaagggccatgtctggaaatcagcggcggccgc
catccggtggtggaggatgcgctgcgccgcgacggccagcccttcgtcgccaacgactgc
cggcttggggcaagcgaccggctctggctggtcacaggcccgaacatgggcggcaagtcc
accttcctgcggcagaatgcaatcatcgtcatcctggcccaggcgggcgcttatgtcccc
gcccagtccgctaccctgactctggtcgaccgcctgttcagccgcgtcggcgcgtcggac
aatctggccaagggccgctccaccttcatggtcgagatggtcgagaccgccgccatattg
gcgcaagcgaccgagcgcagcttcgtcatcctggatgaagtcgggcgcggcacgtcgacc
tatgacgggctggcattggcatgggcggtggtggaggcggtgcatgaggtcaaccgctgc
cgttgcctgttcgcgacccattatcatgagctgacccggctggcggagacgctatcctcc
ctttccctccaccatgtccgggcgcgggagtggaagggcgacctggtgttgctgcacgaa
gtcgcggaagggcctgcggaccgcagctacggcctcgccgtggcgaggctggccgggctg
ccccccgccgtgctcaagcgggcgaaggatgtcctctcccgcctggaagcgggcaaggcg
aagaccggcggcatcgcggcggggctggacgacctgcctctgttcgccgccgccgtcgcg
caggtggaggaaaaggccgatccgctccgagccgcgctggacggcatagacgccgacgcg
ctttccccccgcgaggcgctcgatcaactctatcggctcaagcaactggcagcagccggt
cgggatggctag
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