Sphingobium indicum B90A: SIDU_16385
Help
Entry
SIDU_16385 CDS
T04604
Name
(GenBank) AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sinb
Sphingobium indicum B90A
Pathway
sinb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sinb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
SIDU_16385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sinb03019
]
SIDU_16385
03009 Ribosome biogenesis [BR:
sinb03009
]
SIDU_16385
04131 Membrane trafficking [BR:
sinb04131
]
SIDU_16385
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sinb04147
]
SIDU_16385
Messenger RNA biogenesis [BR:
sinb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
SIDU_16385
Ribosome biogenesis [BR:
sinb03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
SIDU_16385
Membrane trafficking [BR:
sinb04131
]
SNARE
SNARE associated proteins
Others
SIDU_16385
Autophagy
Aggrephagy
Other aggrephagy associated proteins
SIDU_16385
Exosome [BR:
sinb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SIDU_16385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_22
AAA_5
CDC48_2
AAA_33
AAA_2
AAA_14
TIP49
IstB_IS21
NACHT
nSTAND3
NPHP3_N
AAA_28
RNA_helicase
AAA_18
Mg_chelatase
AAA_30
AAA_7
AAA_24
ABC_tran
AAA_11
Sigma54_activat
AAA_19
AAA_17
DUF815
TsaE
AAA_3
ATPase
Zeta_toxin
Parvo_NS1
NB-ARC
SLFN-g3_helicase
PhoH
bpMoxR
AAA_lid_PRS2_C
Sigma54_activ_2
Viral_helicase1
AAA_25
Motif
Other DBs
NCBI-ProteinID:
APL95959
UniProt:
A0A1L5BSU1
LinkDB
All DBs
Position
complement(3447526..3449781)
Genome browser
AA seq
751 aa
AA seq
DB search
MANARPEDAGRGLARLPLAVMAELHLAEGDVVEIAGKRSTPARVVRPYKEDEGLDVLRLD
GLQRANAGVGSGDFVVIRKVDPRPAQRVVFAPAQNNLRLQGNPEALKRVFFQRPLASGDV
VATAGQQQVPPGDMPPQLRQMLAAPAYALQEIRLVVVSTVPKGVVHIDAETEVELRAEYE
EPRESRRADVTYDDVGGMAEAIDQLREMVELPLRYPELFERLGVDPPKGVLLHGPPGTGK
TRLARAVANESEAEFFLINGPEIMGSAYGESEKQLREIFEAAAKAAPSILFIDEIDSIAP
KRGNVTGETEKRLVAQLLTLMDGLEPRTNLVVIAATNRPEAIDEALRRPGRFDREIIVGV
PDERGRREILGIHTRGMPLADGVDLGELARMTYGFVGADLAALTREAAIETVRRFMPRLN
LEEGTIPPDVLEELSVARDDFMAAIKRVQPSAMREVMVQAPNIGWADIGGLDDAQMRLKE
GVELPLKDPDAFRRIGIRPAKGFLLYGPPGTGKTLLAKAVAREAQANFIATKSSDLLSKW
YGESEQQIARLFARARQVAPTVIFIDELDSLVPARGGGLGEPQVTERVVNTILAEMDGLE
ELQSVVVIGATNRPTLIDPALLRPGRFDELIYVPVPDRTGRRRILSIHTGKMPLADDVDL
DLLAERTERFTGADLEDLVRRAGLVALRQSLSVDKVSQAHFEAALEDTRASVTPEMEREY
EQIQATLKQSVMQIDPIGFVSPGMLRGRARD
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
gtggccaacgcccggccggaggatgcggggcgcggccttgcccggctgccgctggcggtg
atggcggaactccaccttgccgaaggggatgtggtggagatcgcgggcaagcggtccacc
cccgcgcgcgtggtccggccctacaaggaggatgaggggctggacgtccttcgcctcgac
gggcttcagcgggccaatgcgggcgtcggatcgggcgacttcgtggtcatccggaaggtc
gatccccgccccgcccagcgcgtcgtcttcgcgcctgcacaaaacaatctgcggttgcag
ggcaatcccgaagcgttgaagcgggttttcttccagcggccgctggcgtccggcgatgtc
gtcgccaccgccgggcagcagcaggtgccccccggcgacatgccgccccagttgcgccag
atgctggccgcgccggcctatgccctgcaggagattcgcctggtcgtggtgtcgacggtg
cccaagggcgtcgtccatatcgatgcggagaccgaggtcgaactgcgcgccgaatatgag
gagccccgcgaatcccgccgggccgacgtcacctatgacgatgtcggcggcatggccgag
gccatcgaccagttgcgcgagatggtggaactgccgctgcgctatcccgaactgttcgag
cggctgggcgtcgatccgcccaagggcgtgctgctccacggcccgcccggcaccggcaag
acccggctggcccgcgccgtcgccaatgaatcggaagccgaattcttcctgatcaacggg
ccggagatcatggggtcggcctatggcgaatcggaaaagcagcttcgcgagattttcgag
gcggcggccaaggcggccccgtcgatcctgttcatcgacgagatcgattccatcgcgccc
aagcgcggcaatgtgaccggcgagacggaaaagcgcctcgtcgcgcaattgctgacgctg
atggacgggctggagccgcgcaccaacctggtcgtcatcgccgccaccaaccggccggag
gcgatagacgaggcgctgcgccgtcccggccgcttcgaccgggagatcatcgtcggcgtg
cccgacgagcgcggacggcgggagatattgggcatccacacccgcggcatgccgctggcc
gacggcgtcgacctgggcgaactggcgcgcatgacctacggctttgtcggtgcggaccta
gccgcgttgacccgcgaggcggcgattgaaaccgtgcgccgcttcatgccccggctcaac
ctggaggagggaacgatcccgcccgacgtgctggaggaactgtccgtagcgcgcgacgac
ttcatggccgcgatcaaacgcgtccagccctccgccatgcgcgaggtgatggtgcaggcg
ccgaacatcggctgggccgacataggcgggctggacgacgcgcagatgcggttgaaggaa
ggggtggaactgccgctgaaagaccctgacgccttccgccgcatcggcatccgcccggcc
aagggcttcctgctctacggcccgcccggcaccggcaagaccttgctggcgaaggccgtg
gcgcgggaggcgcaggccaatttcatcgccaccaaatcgtccgacctgctcagcaaatgg
tatggggagagcgagcagcagatcgcccgcctcttcgcccgcgccaggcaggttgcgccg
accgtcatcttcatcgacgaactggacagcctggtcccggcgcggggcgggggcctgggc
gaaccgcaggtgacggagcgggtggtgaacaccatattggccgagatggacgggctggag
gaattgcagtccgtggtcgtcatcggcgcgaccaaccggccgaccctgatcgatccggcg
ctgttgcggccggggcggttcgacgagctgatctatgtcccggttccggatcggacgggg
cgcaggcggatattgtccatccatacgggcaagatgccgctggccgacgatgtcgatctg
gacctgctggccgagcggaccgagcgcttcaccggcgccgacctggaggatctggtccgc
cgcgccggcctggtcgcgctgcgccagtcgctgtcggtcgacaaggtcagccaggcgcat
ttcgaagccgcgctggaggacacccgcgcctccgtcacgccggagatggagcgcgaatat
gagcagatacaggcgacgctgaagcagagcgtgatgcagatcgatcccatcggcttcgtg
tcgccgggcatgctgcgggggcgcgccagggattga
DBGET
integrated database retrieval system
