Sphingobium indicum B90A: SIDU_16960
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Entry
SIDU_16960 CDS
T04604
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
sinb
Sphingobium indicum B90A
Pathway
sinb00071
Fatty acid degradation
sinb00362
Benzoate degradation
sinb00650
Butanoate metabolism
sinb01100
Metabolic pathways
sinb01120
Microbial metabolism in diverse environments
sinb01200
Carbon metabolism
sinb01212
Fatty acid metabolism
Module
sinb_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sinb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SIDU_16960
09103 Lipid metabolism
00071 Fatty acid degradation
SIDU_16960
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SIDU_16960
Enzymes [BR:
sinb01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SIDU_16960
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Peptidase_S49
F420_oxidored
ApbA
Ion_trans
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
APL96067
UniProt:
A0A1L5BTB3
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Position
3563384..3565453
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AA seq
689 aa
AA seq
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MKQTATSVVVDGVALITLDNPPVNALSAPLRQGLQAGLEQAFGDEEVGAILLLCAGRTFI
AGADITEFGQPWQPPSLPDLCAMLDDAPKPVIAAIHGTALGGGFELALTCHYRVAARSAK
VGLPEVHLGLLPGAGGTQRVPRIVGTEAALEIITSGRQIKAAEALSLGLVDAVVDDAALA
EEALAFARRVVADGGAKPRIRDRADALQADRDRPDLFTAFAAAHARRFKGFVAPAAIIEA
VEAAVTLPFEEGLAKETALFERLVASPESAAQRHVFFAEREAARVPDIGPDISAIDIRSV
GVIGAGTMGGGITMNFLNAGIPVTLVETSQEALDRGIATIRRNYEATAAKGRMTGAQVEQ
RMALISPSLDLAALADADLIIEAVYESMDVKTDIFARLDRIAKAGTILASNTSFLDLNRI
AAATSRPEWVVGLHFFSPANVMRLLEVVRGAATSKPVVATAMRLAKRIGKVAVLSGVCDG
FIANRLLAPRGAQAEAMMLEGTPIAEIDRVLVDYGFAMGHFQMMDLVGLDVIGRNATERT
VMGDLVTAGRLGQKGGAGYYDYDEKRRSRPSDVTDSLIKEVAAARGVAHAPTSGDEALLA
RLLYPVVNEGAKILEEGIALRASDIDIAAVLGYNWPVYRGGPLFWADQVGLDRIVVEMRR
LEAVHGETFCPAPLLVRLAEAGRRFGDGS
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagaccgcaaccagcgtcgtcgtcgacggcgtcgccctgatcacgctcgacaat
ccgccggtgaacgcgctctccgcgcccctgcggcagggattgcaggccggactcgaacag
gcgttcggcgacgaagaggttggcgccatcctgttgctctgcgccgggcggaccttcatc
gccggcgcggacatcaccgaattcggccagccctggcagccgccgtccttgcccgacctc
tgcgcgatgctggacgatgcgcccaagcccgtcatcgccgccattcacggcacggcgctt
ggcggcggtttcgaactggcgctcacctgccactatcgggtggcggcgcggagcgcgaag
gtcggcctgccggaggtgcatctgggcctgctccccggcgcgggcggcacccagcgcgtg
ccccggatcgtcggcacggaggcggcgctcgaaatcatcacgtcggggcggcagatcaag
gcggccgaagccctttcgctcggcctggtcgatgccgtggtcgacgacgcggccttggcg
gaagaggcgctggccttcgcgcgccgcgtcgtggccgatggcggcgcgaaaccgcggata
cgtgaccgggccgacgcgctccaggccgatagggatcgcccggacctgttcaccgccttc
gccgccgcacatgcgcgccggttcaaggggttcgtcgcgcccgccgccattatcgaggcc
gtcgaggcggcagtgaccctccccttcgaggaggggctggcgaaggaaaccgccctgttc
gaacggctggtcgccagcccggagtccgccgcccagcgccatgtcttcttcgccgagcgg
gaggcggcccgcgttcccgacatcggtcccgacatatccgcgatcgacatccggtcggtc
ggcgtcatcggcgcgggcacgatgggcggcggcatcacgatgaacttcctgaacgcgggc
atccccgtcacgctggtcgaaaccagccaggaagcgctggatcgcggcatcgccaccatc
cgccgcaactatgaggcgacggccgccaaggggcggatgacgggtgcgcaggtggaacag
cgcatggcgctgatatcgcccagcctcgacctcgccgcgcttgctgacgccgatctcatc
atcgaagccgtctatgagagcatggacgtcaagacggacatcttcgccaggctcgaccgg
atcgccaaagcgggcacgatcctggcgtccaacacctccttcctcgacctcaatcgcatc
gccgcggcgaccagccggccggaatgggtcgtcggcctccacttcttctcgcccgccaat
gtcatgcgcctgctggaggtggtgcgaggcgcggcaacgtccaagcccgtggtcgcgacg
gcgatgcggctcgccaagcggatcggcaaggtggcggtgctgagcggggtgtgcgacggc
ttcatcgccaaccgtctgctggctccgcgcggcgctcaggccgaagcgatgatgctggaa
ggcacgccgattgcggagatcgaccgcgtgctcgtcgattacggctttgccatgggccat
ttccagatgatggatctggtcgggctggacgtcattggccggaacgcgacggaacggacc
gtgatgggcgatctggtcaccgccggtcggctgggccagaagggcggcgcgggctattat
gattatgacgagaagcggcgctcgcgtccttcggacgtgacagacagcctgataaaggag
gtggcggcagcccggggcgtcgcgcatgcccccacgtcgggcgacgaagcgctgcttgcg
cggctgctctatccggtcgtcaacgagggcgcgaagatcctggaggaaggcatcgcgctg
cgcgcctccgacatcgatatagcggccgtgctgggctataactggccggtctatcgcggt
ggaccgcttttctgggccgatcaggtggggctggaccggatcgtcgtggagatgcgccgg
cttgaggcggtgcatggcgaaaccttctgccccgcgccgctgctcgtgcggctggcggag
gcggggcggcggttcggcgacggatcgtga
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