Stenotrophomonas indicatrix: DAIF1_00020
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Entry
DAIF1_00020 CDS
T07128
Symbol
dnaN
Name
(GenBank) beta sliding clamp
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
sinc
Stenotrophomonas indicatrix
Pathway
sinc03030
DNA replication
sinc03430
Mismatch repair
sinc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DAIF1_00020 (dnaN)
03430 Mismatch repair
DAIF1_00020 (dnaN)
03440 Homologous recombination
DAIF1_00020 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sinc03032
]
DAIF1_00020 (dnaN)
03400 DNA repair and recombination proteins [BR:
sinc03400
]
DAIF1_00020 (dnaN)
Enzymes [BR:
sinc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DAIF1_00020 (dnaN)
DNA replication proteins [BR:
sinc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DAIF1_00020 (dnaN)
DNA repair and recombination proteins [BR:
sinc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DAIF1_00020 (dnaN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
DUF61
PH_GEF_YEL1
Amino_oxidase
Motif
Other DBs
NCBI-ProteinID:
QBR42487
LinkDB
All DBs
Position
1609..2709
Genome browser
AA seq
366 aa
AA seq
DB search
MRFTLQREAFLKPLAQVVNVVERRQTLPVLANFLVQVQNGQLSLTGTDLEVEMVSRIAVE
DAQDGETTIPARKLFEIIRALPDGSRITVSQTGDKITVQAGRSRFTLATLPSNDFPSVDE
VEATERVAIGEATLKELIERTAFAMAQQDVRYYLNGLLFDLRGDALRTVATDGHRLALCE
TDLAKPSGSKRQIIVPRKGVTELQRLLESGDREIELEVGRSHVRVKRDDVTFTSKLIDGR
FPDYEAVIPIGADREVKVDREALRASLQRAAILSNEKYRGIRVEVSPGNLKISAHNPEQE
EAQEEIEADTTVSDLAIGFNVNYLLDALSALRDEEVIIQLRDSNSSALVRESSSEKSRHV
VMPLRL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcacactgcagcgcgaagcctttctcaagccgttggcacaggtcgtcaacgtg
gtcgaacgccgccagacccttccggttctggccaatttcctggtgcaggtgcagaacggc
cagctgtcgctgaccggtaccgacctggaagtggagatggtgtcgcggatcgcggttgaa
gatgcccaggacggcgaaaccaccattcccgcccgcaagctgttcgagatcatccgcgcc
ctgcctgatggcagccggatcaccgtctcgcagaccggtgacaagatcaccgtgcaggca
ggacgcagccgcttcaccctggccaccctgccctccaacgacttcccgtcggtggacgaa
gtggaagccaccgagcgtgttgcgatcggcgaagcaaccctgaaggagctgatcgagcgc
actgcgttcgcgatggcccagcaggacgtgcgctattacctcaacggcctgctgttcgac
ctgcgcggagatgcgctgcgcactgtcgccaccgacggtcatcggctggccctgtgcgaa
accgatctggccaagcccagcggttccaagcgccagatcatcgtgccgcgcaagggcgtg
accgagttgcagcgcctgctggaaagcggtgatcgcgagatcgaactggaagtcggccgt
agccacgttcgcgtgaagcgcgacgatgtgaccttcacttcgaagctgatcgacggtcgc
ttcccggattacgaggcagtgattccgattggtgccgaccgcgaggtgaaggttgatcgc
gaagcactgcgtgcctcgctgcagcgtgctgcgatcctgtccaacgagaagtaccgcggc
atccgcgtggaagtttcgccgggcaacctgaagatcagcgcgcacaacccggagcaggaa
gaagcccaggaagagatcgaggccgacaccacggtcagcgacctggccatcggcttcaac
gtgaactacctgctggatgccctctccgccctgcgcgacgaagaagtgatcatccagctg
cgcgattccaattcctcggcgctggtgcgggaatccagcagcgagaagtcgcgtcatgtg
gtgatgccgttgcgtctctga
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